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Influenza (Flu)

Influenza is an acute viral respiratory infection caused by Influenza viruses A and B, representing one of the most sign... MRCP, FRACP exam preparation.

Updated 11 Jan 2026
Reviewed 17 Jan 2026
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MedVellum Editorial Team
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Reviewed by MedVellum Editorial Team · MedVellum Medical Education Platform

Credentials: MBBS, MRCP, Board Certified

MRCP
FRACP
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Clinical reference article

Influenza (Flu)

1. Clinical Overview

Summary

Influenza is an acute viral respiratory infection caused by Influenza viruses A and B, representing one of the most significant global public health challenges. Influenza A is responsible for seasonal epidemics and all known pandemics, while Influenza B causes seasonal outbreaks with generally milder disease. [1,2]

The illness is characterised by abrupt onset of systemic and respiratory symptoms: high fever (38-40°C), severe myalgia, headache, profound fatigue, dry cough, and sore throat. Unlike the common cold, influenza is distinguished by prominent systemic symptoms that can leave patients bedridden for several days. The pathophysiology involves viral replication in respiratory epithelium triggering extensive cytokine release, which accounts for the dramatic constitutional symptoms. [3,4]

While most healthy adults experience self-limiting illness resolving within 5-7 days, influenza causes substantial morbidity and mortality in high-risk populations: adults ≥65 years, pregnant women, individuals with chronic medical conditions (particularly cardiorespiratory disease, diabetes, immunosuppression), and those with severe obesity (BMI ≥40). These groups account for the majority of hospitalisations and deaths, with case-fatality rates up to 100-fold higher than in young healthy adults. [5,6]

Complications include primary viral pneumonia (rapidly progressive, high mortality), secondary bacterial pneumonia (typically 3-7 days after initial improvement), acute respiratory distress syndrome (ARDS), myocarditis, and exacerbations of underlying chronic conditions. Bacterial superinfection is most commonly caused by Staphylococcus aureus (including MRSA), Streptococcus pneumoniae, and Haemophilus influenzae. The biphasic pattern of initial improvement followed by clinical deterioration is pathognomonic for secondary bacterial pneumonia. [7,8]

Management is primarily supportive in uncomplicated cases. Neuraminidase inhibitors (oseltamivir, zanamivir) reduce symptom duration by approximately 1 day when initiated within 48 hours of symptom onset and are recommended for all hospitalised patients and high-risk outpatients regardless of illness duration. Meta-analyses demonstrate that oseltamivir reduces complications by 25-44% in high-risk patients and mortality by approximately 25% in hospitalised patients. [9,10]

Annual vaccination remains the cornerstone of prevention, with quadrivalent vaccines targeting two Influenza A strains (H1N1, H3N2) and two Influenza B lineages (Victoria, Yamagata). Vaccine effectiveness varies by season (typically 40-60%) depending on antigenic match, but consistently reduces severity, complications, and mortality even when protection against infection is suboptimal. Vaccination also reduces cardiovascular events, with 15-45% reduction in myocardial infarction risk documented in multiple studies. [11,12]

Clinical Pearls

"Sudden Onset, Know the Hour": Patients with influenza can often identify the precise hour symptoms began—a key distinguishing feature from other respiratory infections which develop gradually. This abrupt onset reflects the rapid viral replication kinetics and explosive cytokine response characteristic of influenza pathogenesis.

"Influenza ≠ Common Cold": Cold (rhinovirus) = Gradual onset over 1-2 days, predominantly nasal symptoms (rhinorrhoea, sneezing), minimal systemic upset, no/low-grade fever. Influenza = Abrupt onset within hours, high fever (> 38.5°C), severe myalgia, profound prostration, prominent dry cough. This distinction is clinically crucial for appropriate antiviral use and patient counselling.

"The 48-Hour Rule (With Exceptions)": Neuraminidase inhibitors are most effective when started within 48 hours of symptom onset for symptom reduction. However, treatment should NOT be withheld beyond 48 hours in hospitalised or deteriorating patients—mortality benefit persists in severe disease regardless of timing. [10]

"Biphasic Fever = Bacterial Superinfection": Initial improvement followed by clinical deterioration with recurrent fever, productive cough, and respiratory distress suggests secondary bacterial pneumonia—typically occurs 3-7 days after symptom onset. This pattern reflects initial viral epithelial damage creating conditions for bacterial invasion.

"Vaccinate the Vulnerable Annually": Priority groups include ≥65 years, pregnant women (any trimester), chronic respiratory/cardiac/renal/hepatic/neurological/diabetes/immunosuppression, BMI ≥40, healthcare workers, and care home residents. Vaccination reduces not only influenza infection but also cardiovascular mortality.

"Pregnancy is High Risk": Physiological changes in pregnancy (reduced functional residual capacity, altered cell-mediated immunity, increased oxygen consumption) increase risk of severe influenza 4-7 fold. Vaccination is safe and strongly recommended in any trimester, protecting both mother and infant through transplacental antibodies. [13]

"Oseltamivir Dosing in Renal Impairment": Requires dose adjustment—CrCl 30-60: 30mg BD; CrCl 10-30: 30mg OD; CrCl less than 10: 30mg after each dialysis session. Failure to adjust dosing can lead to drug accumulation and neuropsychiatric adverse effects.

"The Cytokine Storm Paradox": Severe influenza outcomes paradoxically occur in those with robust immune responses (young adults in 1918 pandemic, H5N1 cases). Excessive interferon and pro-inflammatory cytokine production drives ARDS and multi-organ failure. This explains why immunomodulation has been explored as adjunctive therapy in severe cases. [14]


2. Epidemiology

Global Burden

Influenza causes 3-5 million cases of severe illness and 290,000-650,000 respiratory deaths globally each year, with pandemic years substantially exceeding these figures. In temperate regions, seasonal epidemics occur in winter months (November-March in Northern Hemisphere; May-September in Southern Hemisphere), while tropical regions may experience year-round transmission or bimodal peaks. The winter seasonality is driven by absolute humidity, temperature, and indoor crowding patterns. [1,15]

In the United Kingdom, annual influenza epidemics result in an average of 10,000-30,000 excess deaths, with the vast majority (> 90%) occurring in adults ≥65 years. Excess all-cause mortality during severe seasons can increase by 20-40% above baseline, predominantly from cardiovascular and respiratory causes. The 2017-2018 season was particularly severe, with approximately 50,000 excess deaths associated with influenza and H3N2 predominance. [16]

Demographics and Risk Factors

FactorDetailNotes
AgeBimodal riskYoung children (less than 5 years) and elderly (≥65 years) have highest hospitalisation rates. Mortality concentrated in elderly (50-100× higher than young adults).
SeasonalityTemperate winter patternNorthern Hemisphere: November-March peak. Absolute humidity less than 5-6 g/m³ strongly correlates with transmission. Temperature inversely correlates.
Attack Rate5-20% annuallyHigher in institutional settings (schools, care homes, military barracks). Pandemic years: 20-40%. Children have higher attack rates than adults.
Incubation1-4 days (mean 2)Viral shedding begins 24-48 hours before symptom onset, enabling pre-symptomatic transmission. Peak shedding days 2-3 of illness.
TransmissionDroplet + contactDroplets (less than 1 metre), fomites (surfaces remain infectious 24-48 hours on hard surfaces, 8-12 hours on fabric), possibly aerosol in enclosed spaces during aerosol-generating procedures.
R₀ (Basic Reproduction Number)1.2-1.6 (seasonal); 1.4-2.8 (pandemic)Average number of secondary infections from one infected individual in susceptible population. Herd immunity threshold requires 50-70% immunity.

Virus Types and Subtypes

TypeCharacteristicsClinical Significance
Influenza A18 H subtypes (H1-H18), 11 N subtypes (N1-N11)Causes seasonal epidemics and all known pandemics. Currently circulating: H1N1pdm09 and H3N2. Infects humans, birds, pigs, horses, marine mammals. Segmented genome enables reassortment.
Influenza BTwo lineages: Victoria, YamagataSeasonal epidemics only. Generally less severe than Influenza A. Only infects humans (and seals). Slower antigenic evolution. Does not cause pandemics due to lack of animal reservoir.
Influenza CMild sporadic illnessNot epidemiologically significant. Causes minor upper respiratory symptoms. Rarely detected.
Influenza DCattle primarilyDoes not infect humans. Identified in 2011.

Currently Circulating Strains (2025-2026 Season):

  • A(H1N1)pdm09 — Descendant of 2009 pandemic strain. Generally less severe than H3N2. More common in younger adults. Associated with primary viral pneumonia in severe cases.
  • A(H3N2) — Undergoes more rapid antigenic drift due to higher mutation rate and egg adaptation during vaccine production; often associated with severe seasons, particularly affecting elderly. Vaccine effectiveness typically lower against H3N2.
  • B/Victoria — Predominant B lineage since 2020. Generally causes milder disease than Influenza A.
  • B/Yamagata — Declining circulation since 2020; possibly extinct due to COVID-19 public health measures. May be removed from future vaccine formulations.

High-Risk Groups for Severe Disease

GroupMechanismSpecific Risks
Age ≥65 yearsImmunosenescence, comorbidities, ↓ mucociliary clearanceMortality rate 50-100× higher than young adults. Reduced vaccine immunogenicity (30-40% vs 60-80% in young adults). Atypical presentations common.
Pregnancy↓ Cell-mediated immunity, ↓ FRC (200ml reduction 3rd trimester), ↑ O₂ consumption (20%), ↑ cardiac output, diaphragm elevation4-7× increased hospitalisation risk. Risk highest in 3rd trimester (4-fold) but present throughout. Fetal risks: preterm labour, low birth weight. Safe to vaccinate—protects mother and infant. [13]
Chronic RespiratoryAsthma, COPD, bronchiectasis, ILD, cystic fibrosisExacerbations, secondary infection, respiratory failure. COPD patients: 2-4× hospitalisation risk. Asthma: 4× hospitalisation in children, 2× in adults.
Chronic CardiacCHF, IHD, congenital heart disease, valvular diseaseDecompensation, myocardial infarction (6-10× increased risk in week following influenza), arrhythmia, pulmonary oedema. Vaccination reduces cardiovascular mortality 15-45%. [17]
Diabetes MellitusType 1 or 2, impaired neutrophil function, microvascular diseaseDiabetic ketoacidosis, hyperglycaemic hyperosmolar state. 3× hospitalisation risk. 6× mortality risk. Glycaemic control worsens during acute illness.
Chronic Kidney DiseaseCKD 3-5, dialysis, nephrotic syndromeReduced immune response. Fluid overload risk. Oseltamivir dose adjustment required. 2-3× mortality risk.
ImmunosuppressionHIV (CD4 less than 200), chemotherapy, transplant, biologics (TNF-α inhibitors, rituximab), corticosteroids > 20mg/day > 2 weeksProlonged viral shedding (weeks to months). Severe/disseminated disease. Oseltamivir resistance may develop (H275Y mutation). May require extended treatment courses (10 days).
Severe ObesityBMI ≥40 kg/m²Impaired respiratory mechanics (↓ lung volumes, ↑ airway resistance), pro-inflammatory state, ↑ risk of VTE. 2-3× ICU admission risk. Independent risk factor in H1N1pdm09 pandemic.
Chronic Liver DiseaseCirrhosis, chronic hepatitis, portal hypertensionHepatic decompensation, hepatorenal syndrome. Increased mortality. Vaccination response may be impaired in advanced cirrhosis.
Neurological DiseaseStroke, dementia, Parkinson's, MND, MS, cerebral palsy, epilepsy, learning disabilitiesAspiration risk, inability to clear secretions, impaired cough reflex. Delirium common. Functional decline may be permanent.
Haematological MalignancyLeukaemia, lymphoma, myelomaProfound immunosuppression. Highest risk group. Mortality up to 10-20% in some series.
Healthcare WorkersOccupational exposure, nosocomial transmissionProtect patients and self. Vaccination mandated in many jurisdictions (ethical duty of care). Higher infection rates during outbreaks.

Mortality Data

  • Case Fatality Rate (CFR): less than 0.1% in healthy adults; 1-5% in high-risk groups; up to 30% in ICU with ARDS
  • Excess Mortality: 90% of deaths occur in ≥65 age group. Cardiovascular deaths account for 30-50% of excess mortality (often attributed to other causes).
  • Leading Causes of Death: Pneumonia (primary viral or secondary bacterial 40%), ARDS (15%), cardiovascular events (30%), exacerbation of underlying disease (15%)
  • Pandemic Mortality: Highly variable. 1918 H1N1 ("Spanish Flu"): 50-100 million deaths, CFR ~2.5%, unusual W-shaped mortality curve with peak in young adults. 2009 H1N1: ~150,000-575,000 deaths globally, CFR ~0.02%, mostly in younger individuals and those with obesity.

3. Pathophysiology

Virus Structure

Influenza viruses are single-stranded, negative-sense RNA viruses belonging to the Orthomyxoviridae family. The genome consists of 8 gene segments encoding 10-14 proteins (depending on strain and counting splice variants). This segmented structure allows genetic reassortment when two different strains co-infect the same cell—the molecular mechanism underlying antigenic shift and pandemic emergence. [2,18]

Key Surface Glycoproteins:

ProteinFunctionClinical Relevance
Haemagglutinin (H)Binds to sialic acid receptors (α2,6-linkage in humans; α2,3-linkage in birds) on respiratory epithelium → Cell entry via receptor-mediated endocytosisPrimary target of neutralising antibodies (immunodominant). Determines host tropism. Vaccine antigen. 18 subtypes (H1-H18) identified in nature. Mutations lead to antigenic drift.
Neuraminidase (N)Sialidase enzyme; cleaves sialic acid → Releases progeny virions from infected cell and prevents viral aggregationTarget of oseltamivir, zanamivir, peramivir. Enables viral spread. 11 subtypes (N1-N11). H275Y mutation confers oseltamivir resistance in N1.

Internal Proteins:

  • M2 (Matrix-2): Proton channel; acidifies virion interior during uncoating. Target of adamantanes (amantadine/rimantadine)—now obsolete due to > 95% resistance in circulating strains (S31N mutation).
  • M1 (Matrix-1): Structural protein; mediates assembly and budding.
  • PB1, PB2, PA: Polymerase complex (RNA-dependent RNA polymerase); replicates viral genome and transcribes mRNA via cap-snatching from host mRNA. Target of baloxavir (cap-dependent endonuclease inhibitor). PA-I38T mutation confers baloxavir resistance.
  • NP (Nucleoprotein): Encapsidates viral RNA; type-specific antigen used in diagnostic assays.
  • NS1 (Non-structural protein 1): Interferon antagonist; major virulence factor. Blocks RIG-I signalling and mRNA processing.
  • NEP/NS2: Nuclear export protein; mediates export of viral ribonucleoproteins from nucleus.

Antigenic Variation

MechanismProcessConsequenceFrequency
Antigenic DriftPoint mutations in H and N genes during RNA replication (error-prone polymerase, no proofreading). Accumulation of amino acid substitutions in antigenic sites.Gradual antigenic change. Allows virus to evade pre-existing immunity (original antigenic sin). Necessitates annual vaccine reformulation. Responsible for seasonal epidemics.Continuous (every season). H3N2 drifts faster than H1N1.
Antigenic ShiftReassortment of gene segments when two different strains co-infect same cell (typically in pigs—"mixing vessel" express both human and avian receptors). Wholesale replacement of H and/or N segments.New H/N combination. No population immunity. PANDEMIC POTENTIAL. Examples: 1918 H1N1 "Spanish Flu" (avian H1N1 adaptation to humans), 1957 H2N2 "Asian Flu" (H2N2 reassortant), 1968 H3N2 "Hong Kong Flu" (H3N2 reassortant), 2009 H1N1 pandemic (triple reassortant swine/avian/human).Sporadic (decades). Only Influenza A (animal reservoir).

Avian Reservoir: Wild aquatic birds (particularly ducks, geese) are the natural reservoir for all 18 Influenza A subtypes. Avian strains typically cause asymptomatic intestinal infection in birds. Human pandemics arise when avian viruses acquire ability to: (1) bind human-type α2,6-linked sialic acid receptors (requires H protein mutations like E190D, G225D), (2) transmit efficiently between humans (requires polymerase adaptations for replication at cooler human upper airway temperatures). Direct avian-to-human transmission (e.g., H5N1, H7N9) causes severe disease but lacks sustained human-to-human transmission. [19]

Pathogenesis: Infection Cycle

1. Entry and Attachment

  • Inhalation of infectious droplets (> 5µm, travel less than 1-2m) or aerosols (less than 5µm, remain airborne) containing 10²-10⁵ infectious virions
  • Haemagglutinin binds to α2,6-linked sialic acid (Neu5Acα2,6Gal) receptors on respiratory epithelial cells (predominantly trachea, bronchi, bronchioles; alveoli in severe cases)
  • Human upper airway predominantly expresses α2,6 receptors; lower airway has mixed α2,3 and α2,6 expression
  • Receptor-mediated endocytosis → Virus enters cell in clathrin-coated vesicle

2. Uncoating and Replication

  • Endosome acidification (pH 5-6) triggers conformational change in H protein → Fusion of viral and endosomal membranes
  • M2 protein (proton channel) acidifies virion interior → Dissociation of M1 from viral ribonucleoproteins (vRNPs)
  • vRNPs transported to nucleus (unique among RNA viruses)
  • Polymerase complex (PB1-PB2-PA) synthesises:
    • Positive-sense cRNA (complementary RNA) from negative-sense viral RNA (vRNA)
    • vRNA from cRNA templates (genome replication)
    • mRNA via "cap-snatching" (PA endonuclease cleaves 5' caps from host pre-mRNA, steals caps for viral mRNA)
  • Viral proteins synthesised in cytoplasm; H, N, M2 trafficked to plasma membrane via Golgi
  • vRNPs exported from nucleus via NEP/NS2

3. Assembly and Budding

  • Viral components assemble at apical plasma membrane (preferentially lipid rafts enriched in cholesterol and sphingolipids)
  • M1 protein coordinates assembly beneath H/N-enriched membrane domains
  • Budding occurs at apical surface → Progeny virions released into airway lumen
  • Each infected cell produces 10³-10⁴ virions before death (8-12 hours post-infection)
  • Viral replication peaks 48-72 hours post-infection, corresponding to peak symptoms

4. Release and Spread

  • Neuraminidase cleaves sialic acid, releasing progeny virions from host cell surface and preventing viral aggregation
  • Without NA, virions remain tethered to cell surface and aggregate (non-infectious clumps)
  • Neuraminidase inhibitors (oseltamivir) block this step → Localize infection, reduce viral spread
  • Virus spreads to adjacent epithelial cells → Descending infection (initially upper airway, can progress to bronchioles/alveoli in severe cases)

5. Tissue Damage

  • Direct cytopathic effect: Viral replication exhausts cellular resources, disrupts cellular functions → Apoptosis and necrosis of infected epithelial cells
  • Loss of ciliated epithelium → Impaired mucociliary clearance → Pooling of secretions → Predisposition to bacterial superinfection
  • Epithelial denudation exposes basement membrane → Bacterial adherence facilitated (particularly S. aureus and S. pneumoniae)
  • Epithelial damage peaks at 5-7 days, regeneration takes 2-4 weeks for complete repair
  • Severe cases: Diffuse alveolar damage (DAD) → Hyaline membranes, pulmonary oedema, ARDS

6. Immune Response

Innate Immunity (Hours to Days):

  • Pattern recognition receptors (TLR3, TLR7, TLR8, RIG-I, MDA5) detect viral RNA
  • Interferon (IFN-α/β) production → Upregulation of interferon-stimulated genes (ISGs) → Antiviral state in neighbouring cells (inhibits viral replication)
  • Inflammatory cytokines (IL-6, TNF-α, IL-1β, IL-8, MIP-1α) → Systemic symptoms (fever via hypothalamic IL-1/IL-6 action, myalgia via prostaglandin E2 and direct cytokine effects, malaise)
  • Neutrophil and macrophage recruitment → Clear infected cells and debris
  • "Cytokine Storm" in severe cases (excessive IL-6, TNF-α, IFN-γ, IL-1β) → Vascular leak, pulmonary oedema, ARDS, multi-organ failure. More common in H5N1 and 1918 H1N1 (young adults paradoxically). [14]

Adaptive Immunity (Days to Weeks):

  • CD8+ T cells (cytotoxic T lymphocytes) recognise viral peptides on MHC-I → Kill infected cells. Target conserved internal proteins (NP, M1) → Cross-reactive protection against different subtypes (heterosubtypic immunity).
  • CD4+ T cells (helper T cells) provide help for antibody production and cytotoxic responses
  • B cells produce antibodies:
    • "IgM (days 5-7): First antibody response"
    • "IgG (days 10-14): Neutralises virus, prevents re-infection with same strain. Mainly targets H protein (head domain). Subtype-specific."
    • "Mucosal IgA (secretory): Provides local upper airway protection, neutralises virus before cell entry"
  • Memory B and T cells → Long-term immunity to that specific strain (and closely related drifted variants)
  • Immunity is strain-specific (antibodies to H1N1 do not protect against H3N2 or drifted H1N1 variants)

Why Complications Occur

ComplicationMechanism
Primary Viral PneumoniaExtensive alveolar damage by virus → Diffuse alveolar damage (DAD) → Type I pneumocyte necrosis → Hyaline membrane formation → Impaired gas exchange → ARDS. Cytokine storm amplifies damage. More common with H1N1pdm09 and highly pathogenic strains (H5N1). Risk factors: pregnancy, immunosuppression, obesity.
Secondary Bacterial Pneumonia(1) Loss of epithelial barrier + impaired mucociliary clearance → Bacterial access to lower airway. (2) Influenza NA enhances bacterial adhesion (S. aureus, S. pneumoniae). (3) Immune dysregulation (↓ neutrophil function, ↑ anti-inflammatory IL-10) → Impaired bacterial clearance. (4) Prior viral infection upregulates bacterial receptors (platelet-activating factor receptor for S. pneumoniae). Occurs 3-7 days post-onset.
Cardiovascular Events(1) Systemic inflammation (↑ IL-6, TNF-α, CRP) → Plaque instability, thrombosis (↑ platelet activation, ↑ fibrinogen). (2) ↑ Oxygen demand + ↑ heart rate → Myocardial ischaemia. (3) Direct viral myocarditis (rare, but documented in autopsy studies). (4) Neurohormonal activation. MI risk peaks in first week, elevated for 1-2 months. [17]
Exacerbation of Chronic DiseaseInflammatory mediators (leukotrienes, prostaglandins, cytokines) worsen asthma (bronchospasm), COPD (↑ mucus, bronchospasm), heart failure (↑ afterload, fluid retention). Decompensation common.
Neurological Complications(1) Encephalopathy: Metabolic (hypoxia, hyponatraemia, uraemia) > direct CNS invasion (rare). (2) Encephalitis: Direct viral invasion (rare, detected by CSF PCR) or immune-mediated (acute disseminated encephalomyelitis). (3) Guillain-Barré: Post-infectious immune-mediated demyelination (molecular mimicry). (4) Seizures (febrile in children, metabolic in adults).

4. Differential Diagnosis

Comparison of Acute Respiratory Infections

FeatureInfluenzaCommon Cold (Rhinovirus)COVID-19 (SARS-CoV-2)RSVBacterial Pneumonia (S. pneumoniae)
OnsetAbrupt (hours, can state time)Gradual (1-2 days)Variable (1-5 days)Gradual (2-4 days)Variable (hours-days)
FeverHigh (38.5-40°C), sudden, rigorsAbsent or low-grade (less than 38°C)Variable (often high 38-40°C)Moderate in adults (38-39°C)High, persistent (> 39°C), rigors
MyalgiaSevere, diffuse ("body aches")MinimalModerateMildMinimal
FatigueProfound ("cannot get out of bed")MildModerate-severe, prolonged (weeks)ModerateModerate
CoughDry initially, prominent, painfulMild, productive laterDry, can be severe, persistentProductive in adults, worse at nightProductive, purulent sputum, pleuritic
RhinorrhoeaMild, later in illnessProminent, early, profuse, wateryVariable, less prominentProminent, watery → mucopurulentAbsent
Sore ThroatCommon, mild-moderateCommon, early, scratchyLess commonVariableUncommon
HeadacheSevere, frontal, retro-orbitalMildCommon, frontalMildVariable
DyspnoeaUncommon (unless pneumonia)AbsentCommon, progressive, can be severeCommon in severe cases, wheezingCommon, pleuritic chest pain
Anosmia/AgeusiaRare (nasal congestion only)Transient (due to congestion)Common (early COVID, neurotropic)RareAbsent
GI SymptomsOccasional (10-30%, more in children/Influenza B)RareCommon (20-40%, diarrhoea, nausea)Rare in adultsRare
SeasonalityWinter peak (Nov-Mar Northern Hemisphere)Year-round, peaks autumn/springVariable (less seasonal post-2021)Winter peak (Nov-Mar)Year-round, slight winter increase
Duration5-7 days acute (fatigue 2-4 weeks)7-10 days1-3 weeks (variable, long COVID)1-2 weeksDepends on treatment (improves 48-72h with antibiotics)
Chest X-rayNormal (unless complicated)NormalGround-glass opacities, bilateral, peripheralNormal or hyperinflation (air trapping)Lobar consolidation, air bronchograms
Diagnostic TestPCR (gold standard), rapid antigenClinical diagnosis, PCR rarely donePCR, rapid antigenPCRSputum culture, blood cultures, CXR, urinary antigen
Specific TreatmentNeuraminidase inhibitors (oseltamivir) within 48hSupportive onlyNirmatrelvir/ritonavir (Paxlovid) if high-riskSupportive (± ribavirin in severe/immunocompromised)Antibiotics (amoxicillin, co-amoxiclav)

Other Important Differentials

ConditionDistinguishing Features
Pertussis (Whooping Cough)Paroxysmal cough with inspiratory "whoop", post-tussive vomiting, cough > 2 weeks, absence of fever. PCR or culture confirms. Vaccination history (waning immunity).
Mycoplasma pneumoniaeGradual onset, dry cough (prominent, persistent), headache, sore throat, low-grade fever. "Atypical pneumonia" on CXR (patchy infiltrates). Extrapulmonary manifestations (rash, haemolytic anaemia, myocarditis). Serology or PCR.
Infectious Mononucleosis (EBV)Severe pharyngitis with exudates, cervical lymphadenopathy (posterior triangle), splenomegaly, atypical lymphocytes, heterophile antibody (Monospot). Young adults.
Acute HIV SeroconversionFever, pharyngitis, rash (maculopapular), lymphadenopathy (generalised), high-risk exposure 2-6 weeks prior. HIV RNA (4th generation Ag/Ab test).
Streptococcal PharyngitisSore throat (predominant), exudative tonsillitis, cervical lymphadenopathy, absence of cough/rhinorrhoea. Centor criteria. Rapid antigen or culture.
Pulmonary EmbolismSudden dyspnoea, pleuritic chest pain, tachycardia, haemoptysis (25%), risk factors (immobilisation, malignancy, surgery). D-dimer, CTPA. Can present with fever (10-15%).

Red Flags: When to Suspect Complications

FindingSuggestsAction
Persistent fever > 7 days or biphasic fever (initial improvement then recurrence)Secondary bacterial pneumonia (S. aureus, S. pneumoniae)CXR, CRP/PCT, blood cultures, sputum culture. Start antibiotics.
Hypoxia (SpO₂ less than 92% on air)Viral or bacterial pneumonia, ARDSAdmit, oxygen therapy, CXR, consider CT chest, ABG. Oseltamivir + antibiotics.
HaemoptysisSevere viral pneumonia, bacterial superinfection (especially S. aureus necrotising pneumonia), pulmonary embolismUrgent CXR/CT, bronchoscopy if massive. ICU if unstable.
Pleuritic chest painBacterial pneumonia (especially pneumococcal), pulmonary embolismCXR, D-dimer if PE suspected, consider ultrasound for effusion.
Confusion, altered mental statusHypoxic encephalopathy, encephalitis, severe sepsis, hyponatraemia (SIADH common in pneumonia)Admit, ABG, U&Es, LP if encephalitis suspected (after CT brain).
Inability to maintain oral intake, severe vomiting, reduced urine outputSevere dehydration, acute kidney injuryAdmit, IV fluids, U&Es.
Clinical deterioration after initial improvementBacterial superinfection (classic "biphasic" pattern, days 3-7)CXR, inflammatory markers, blood and sputum cultures, antibiotics.
Chest pain, ECG changes, elevated troponinMyocarditis, myocardial infarction (6-10× risk in first week)ECG, troponin, echocardiography. Cardiology referral. Acute coronary syndrome protocol.
Severe headache, photophobia, neck stiffnessMeningitis (rare), meningoencephalitisLP (after CT brain if focal neurology/↓ GCS), CSF PCR for influenza and bacterial pathogens.

5. Clinical Presentation

Classic Presentation (Uncomplicated Influenza)

Symptoms

SymptomCharacteristicsFrequencyPathophysiology
Sudden OnsetPatients can identify the hour symptoms began ("I was fine at lunch, felt terrible by 3pm"). Hallmark feature.> 90%Rapid viral replication kinetics (exponential growth 48-72h) + explosive cytokine release (IL-6, TNF-α peak 24-48h).
FeverHigh (38-40°C), with rigors and chills. Duration 3-5 days. Defervescence may be abrupt.80-95%Hypothalamic response to pyrogens (IL-1β, IL-6, TNF-α, prostaglandin E2). Fever benefits host (↑ immune function, ↓ viral replication at higher temps).
MyalgiaSevere, diffuse muscle aches. "My whole body hurts." Legs, back, shoulders most affected. Can be debilitating.75-90%Cytokine-mediated (IL-6, TNF-α) + prostaglandin E2 sensitisation of nociceptors. Direct muscle inflammation rare (rhabdomyolysis 0.01-0.1%).
HeadacheFrontal or retro-orbital. Severe, throbbing, constant.70-85%Cytokine action on cerebral vasculature + meningeal irritation (sterile inflammation).
Fatigue/MalaiseProfound prostration. "Cannot get out of bed." "Wiped out." Persists 2-4 weeks after acute illness.90-95%Multi-factorial: cytokine effects (IL-1, IL-6 induce sickness behaviour), ↓ caloric intake, muscle catabolism, sleep disruption, post-viral mitochondrial dysfunction.
Dry CoughNon-productive initially (later productive in week 2). Harsh, hacking, painful (retrosternal). Can persist 2-3 weeks.75-90%Epithelial damage + airway inflammation → Loss of ciliated cells → Impaired mucus clearance → Cough reflex hypersensitivity.
Sore ThroatPharyngeal erythema without exudate. Mild-moderate severity.50-70%Viral replication in pharyngeal epithelium + inflammation.
RhinitisNasal congestion, rhinorrhoea (clear → mucopurulent). Less prominent than common cold.50-70%Nasal epithelial infection + inflammation → ↑ mucus production, vascular congestion.
AnorexiaLoss of appetite, nausea (without vomiting in most cases).40-60%Cytokine-mediated (IL-1, TNF-α) suppression of appetite centres (hypothalamus).
GI SymptomsNausea, vomiting, diarrhoea (watery, non-bloody). More common in children and with Influenza B.10-30% (adults); 30-50% (children)Uncertain. Virus rarely detected in stool (unlike norovirus). May be cytokine-mediated or autonomic.

Natural History and Phases

PhaseTimelineFeaturesViral Dynamics
Incubation1-4 days (mean 2 days)Asymptomatic. Viral shedding begins 24-48h before symptoms (pre-symptomatic transmission).Viral replication initiating, below symptomatic threshold. Log-phase growth.
Acute IllnessDays 1-5Fever, myalgia, headache peak in first 2-3 days. Fever typically resolves by day 3-5. Prostration maximal days 2-4.Peak viral shedding days 2-3 (10⁶-10⁹ viral copies/mL nasal wash). Cytokine storm peaks 48-72h.
Early RecoveryDays 5-7Systemic symptoms improve. Fever resolves. Appetite returns. Cough, fatigue persist.Viral clearance initiated. Adaptive immunity emerging (CTL, antibodies detectable day 7-10).
ConvalescenceWeeks 2-4Cough gradually resolves. Fatigue may persist ("post-viral fatigue"). Gradual return to baseline.Viral clearance complete (day 7-10 in healthy adults). Epithelial regeneration 2-4 weeks.

Viral Shedding:

  • Begins: 24-48 hours before symptom onset (explains high attack rates, difficult to contain)
  • Peak: Days 2-3 of illness (highest transmission risk)
  • Duration: 5-7 days in healthy adults; up to 10 days in children; weeks to months in immunocompromised (important for infection control—extended isolation required)
  • Transmission Risk: Highest in first 3-5 days of illness. Droplet precautions until 24-48h fever-free.

Physical Examination Findings

General Examination

SignNotesSignificance
General AppearanceAcutely unwell, flushed, diaphoretic, wrapped in blankets, minimal movementIndicates severity of systemic illness
Temperature38.5-40°C (oral); may be higher (rectal)Fever > 40°C or absence of fever in elderly should raise concern for complications
PulseTachycardia proportionate to fever (10 bpm per 1°C)Disproportionate tachycardia suggests dehydration, myocarditis, or bacterial sepsis
Respiratory RateUsually normal (14-18/min) unless complicatedRR > 20/min suggests pneumonia or hypoxia. RR > 30/min is severe (admission criterion).
Blood PressureUsually normal; may be low if dehydratedHypotension (less than 90/60) suggests severe dehydration or sepsis (bacterial superinfection)
Oxygen Saturation> 95% on air in uncomplicated influenzaSpO₂ less than 92% is RED FLAG (pneumonia, ARDS) → Admit

Head and Neck

SignNotes
ConjunctivaeInjected ("red eyes"), watery
PharynxErythematous (red), non-exudative (no pus—distinguishes from strep throat)
TonsilsMay be mildly enlarged, no exudate
Nasal MucosaErythematous, oedematous, clear or mucopurulent discharge
Cervical Lymph NodesMay be mildly tender, enlarged (1-2cm, mobile, non-matted)

Respiratory Examination

FindingSignificance
InspectionNo respiratory distress (unless complicated). No use of accessory muscles.
PalpationTrachea central. Normal expansion.
PercussionResonant throughout.
AuscultationNORMAL in uncomplicated influenza (clear breath sounds bilaterally). Any abnormality suggests complication:
- Crackles (fine, coarse)Pneumonia (viral or bacterial)
- Bronchial breathingConsolidation (lobar pneumonia)
- Reduced air entryEffusion, collapse, severe pneumonia
- WheezeAsthma/COPD exacerbation
- Dullness to percussionConsolidation or pleural effusion

KEY POINT: Chest examination is NORMAL in uncomplicated influenza. Any abnormality (crackles, bronchial breathing, dullness) indicates complication (pneumonia) and warrants CXR and consideration for admission/antibiotics.

Presentations in Special Populations

Elderly (≥65 years)

  • May have atypical presentation: Less prominent fever (may be absent or low-grade despite severe infection), reduced myalgia/headache
  • Functional decline may be most noticeable feature: inability to perform ADLs, falls, reduced mobility
  • Delirium common presenting symptom (30-50% of elderly with influenza have altered mental status)
  • Falls may occur (multifactorial: delirium, dehydration, orthostatic hypotension)
  • Higher risk of complications even with mild initial symptoms (30-50% develop pneumonia)
  • Lower vaccine efficacy due to immunosenescence (30-40% vs 60-80% in young adults; high-dose or adjuvanted vaccines recommended)
  • Polypharmacy considerations (drug interactions with oseltamivir rare, but renal function often impaired → dose adjustment)
  • Frailty predicts worse outcomes (Clinical Frailty Scale ≥5 has 5× mortality risk)

Pregnant Women

  • Same symptoms as non-pregnant adults initially, but progression can be rapid
  • Higher risk of severe disease: 4-7× increased hospitalisation risk. Risk present from conception, but highest in 3rd trimester (4-fold increased risk).
  • Warning signs requiring urgent assessment:
    • Dyspnoea or chest pain (may indicate pneumonia or pulmonary oedema)
    • Reduced fetal movements (fetal hypoxia)
    • Vaginal bleeding (placental abruption, preterm labour)
    • Contractions or pelvic pressure (preterm labour)
    • Reduced urine output (pre-eclampsia, dehydration)
    • Severe headache or visual disturbances (pre-eclampsia)
  • Oseltamivir is safe in pregnancy—benefits outweigh theoretical risks. Should be started immediately in symptomatic pregnant women. Category C (animal studies show adverse effects, but human benefits likely outweigh risks). No teratogenicity detected in human studies.
  • Vaccination safe in any trimester—strongly recommended (reduces maternal hospitalisation 40%, reduces infant influenza 63% in first 6 months via transplacental antibody transfer)
  • Fetal risks: preterm labour (2× risk), low birth weight, stillbirth (rare, severe maternal illness)
  • Postpartum: Risk persists for 2 weeks postpartum (include in high-risk group)

Immunocompromised (HIV CD4 less than 200, chemotherapy, transplant, biologics)

  • May have prolonged symptoms (> 2 weeks, sometimes months)
  • Prolonged viral shedding (weeks to months) → Infection control: Extended isolation required (droplet precautions until 2 consecutive negative PCRs 24h apart, not just symptom-based)
  • Lower respiratory tract disease more common (bronchiolitis, pneumonia in 30-50%)
  • Risk of oseltamivir resistance developing during treatment (H275Y mutation in N1, especially with suboptimal dosing or prolonged shedding)
  • May require longer treatment courses (10 days rather than standard 5 days; some require suppressive therapy)
  • Vaccine response blunted—consider serological testing (anti-H antibody titres) to confirm seroconversion. May benefit from double-dose vaccination (limited evidence).
  • Higher mortality: 5-20% case-fatality in severely immunosuppressed (haematological malignancy worst prognosis)
  • Consider combination antiviral therapy in severe cases (oseltamivir + IV peramivir or zanamivir), though evidence limited

Patients with Chronic Respiratory Disease (Asthma, COPD, Bronchiectasis)

  • Exacerbations of underlying disease common (30-50%)
  • Increased dyspnoea, wheeze, sputum production (change in colour/volume)
  • Higher risk of bacterial superinfection (impaired clearance mechanisms)
  • May require increased bronchodilators (↑ salbutamol frequency, add ipratropium), corticosteroids (prednisolone 30-40mg OD for 5-7 days), consider antibiotics if purulent sputum/CRP elevated
  • COPD patients: 2-4× hospitalisation risk. Respiratory failure may require NIV or intubation. Oxygen therapy carefully (target SpO₂ 88-92% to avoid CO₂ retention).
  • Asthma patients: Risk of severe exacerbation. Peak flow monitoring. May require ↑ inhaled corticosteroids. Beware zanamivir (inhaled, can cause bronchospasm—use oseltamivir instead).
  • Bronchiectasis: High risk of bacterial superinfection (Pseudomonas, H. influenzae). May require sputum culture-directed antibiotics.

Patients with Diabetes Mellitus

  • Hyperglycaemia during acute illness (stress response with cortisol/catecholamine release, reduced oral intake, cytokine effects on insulin resistance)
  • Risk of diabetic ketoacidosis (type 1) or hyperosmolar hyperglycaemic state (type 2), particularly if nausea/vomiting leads to missed insulin/medications
  • Increased insulin requirements (may need 20-50% increase during acute illness)
  • "Sick day rules": Never stop insulin. Check blood glucose 4-hourly. Check ketones (urine or blood) if glucose > 15 mmol/L. Maintain hydration. Seek help if vomiting/unable to eat.
  • Impaired immune function (neutrophil dysfunction, impaired chemotaxis) → Higher infection rates, slower recovery
  • Monitor blood glucose frequently (at least 4-6 hourly during acute illness)
  • 3× hospitalisation risk, 6× mortality risk compared to non-diabetics

6. Investigations

Diagnostic Approach

Clinical diagnosis is often sufficient during documented influenza season (local surveillance data showing influenza circulation) in patients with compatible symptoms (sudden onset, fever, myalgia, cough). Laboratory confirmation is NOT required for management in uncomplicated outpatient cases.

Testing IS indicated for:

  1. Hospitalised patients (confirm diagnosis, guide antiviral use, infection control, discontinue empirical antibiotics if influenza confirmed and no bacterial co-infection)
  2. High-risk outpatients where result will influence antiviral treatment decision (though increasingly, treat empirically without waiting for results)
  3. Atypical or severe illness (differential diagnosis, exclude other pathogens)
  4. Outbreak investigation / public health surveillance (confirm influenza, determine subtype, detect novel strains, monitor resistance)
  5. ICU patients with severe respiratory illness (multiplex respiratory PCR panel to identify pathogen and guide therapy)
  6. Pregnancy, immunocompromised, or other high-risk groups if diagnosis unclear

Influenza-Specific Tests

TestMethodSensitivitySpecificityTimeNotes
RT-PCR (Reverse Transcription Polymerase Chain Reaction)Nasopharyngeal or throat swab, NPA, BAL90-95%> 95%1-6 hours (lab-based); 15-30 min (point-of-care molecular)GOLD STANDARD. Detects viral RNA. Identifies Influenza A vs B. Can subtype (H1 vs H3). Can detect co-infections.
Rapid Molecular Assay (NAAT)Point-of-care PCR (e.g., Cepheid Xpert Flu)85-95%90-95%15-30 minNear-PCR sensitivity. Increasingly used in ED/urgent care/GP. Expensive per test. Enables real-time treatment decisions.
Rapid Antigen Detection Test (RADT)Nasal swab, immunochromatographic assay (lateral flow)50-70%90-95%10-15 minPoor sensitivity (misses 30-50% of cases). High specificity (positive result reliable). Negative result does NOT exclude influenza. Useful in high-prevalence settings (positive result confirms, negative result does not exclude). Cheap.
Viral CultureCell culture (MDCK cells)Variable (60-80%)High (> 95%)3-10 daysNOT used for clinical diagnosis (too slow). Research/surveillance only. Detects viable virus. Allows phenotypic resistance testing. Required for vaccine strain selection.
Serology (Antibody Detection)Paired acute/convalescent sera (4-fold rise in titre diagnostic)N/A (retrospective)N/AWeeksNot used for acute diagnosis. Retrospective/epidemiological studies only. Useful for seroprevalence surveys (population immunity).
Direct Fluorescent Antibody (DFA)Nasopharyngeal cells stained with fluorescent antibodies60-80%85-95%2-4 hoursObsolete in most settings (replaced by PCR). Requires skilled technician.

Specimen Collection:

  • Nasopharyngeal swab/aspirate preferred (highest viral load, 80-90% sensitivity)
  • Throat swab acceptable (slightly lower sensitivity 70-80%)
  • Nasal swab (mid-turbinate) acceptable for rapid tests
  • BAL (bronchoalveolar lavage) in intubated patients (highest sensitivity, can detect when upper airway negative)
  • Timing: Best within first 3-4 days of illness (peak viral shedding). Viral load decreases after day 5 → False negatives possible with all tests (including PCR).
  • Technique: Insert swab to posterior nasopharynx (parallel to palate, not upwards), rotate 10-15 seconds, withdraw. Immediate transport in viral transport medium (VTM) or universal transport medium (UTM). Keep at 4°C if delayed processing.

Multiplex Respiratory Panels

Many laboratories now use multiplex PCR panels (e.g., BioFire FilmArray, Luminex xTAG) that detect 15-25 respiratory pathogens simultaneously:

Viruses Detected:

  • Influenza A (with subtyping H1/H3), Influenza B
  • SARS-CoV-2 (all variants)
  • Respiratory Syncytial Virus (RSV) A/B
  • Parainfluenza 1, 2, 3, 4
  • Human metapneumovirus (hMPV)
  • Rhinovirus/Enterovirus
  • Adenovirus
  • Coronavirus (HKU1, NL63, 229E, OC43)
  • Human bocavirus (children)

Bacteria Detected (some panels):

  • Mycoplasma pneumoniae
  • Chlamydia pneumoniae
  • Bordetella pertussis
  • Legionella pneumophila (on some panels)

Advantages:

  • Single test, rapid (1-2 hours), comprehensive
  • Detects co-infections (10-30% of influenza patients have co-detection, clinical significance uncertain)
  • Useful in ICU/immunocompromised (higher rate of atypical/multiple pathogens)
  • Informs infection control (isolate RSV, influenza in separate rooms)

Disadvantages:

  • Cost (£100-200 per test vs £20-50 for single-pathogen PCR)
  • Potential for co-detection of colonising organisms (rhinovirus, coronavirus detection may represent asymptomatic carriage, especially in children)
  • Does not distinguish Influenza subtypes on all panels (some only report A vs B)
  • Clinical utility of knowing multiple viruses detected is uncertain (management usually unchanged)

Investigations for Complications / Severe Disease

All Hospitalised Patients

TestIndicationInterpretation
FBC (Full Blood Count)Baseline, assess for bacterial superinfectionLymphopenia (lymphocytes less than 1.0 × 10⁹/L) common in viral infection (50-70% of influenza). Neutrophilia (neutrophils > 10 × 10⁹/L) suggests bacterial pneumonia. Thrombocytopenia may occur (immune-mediated or DIC in sepsis).
U&Es (Urea & Electrolytes)Renal function, hydration statusDehydration common (↑ urea, ↑ creatinine). Hyponatraemia (Na less than 135) in 20-30% (SIADH from pneumonia/viral infection). Renal function needed for oseltamivir dosing. AKI may develop (pre-renal dehydration, rhabdomyolysis, sepsis).
CRP (C-Reactive Protein)Bacterial vs viral differentiationMildly elevated (20-60 mg/L) in viral infection. High CRP (> 100 mg/L) suggests bacterial pneumonia (though not absolute—severe viral pneumonia can have high CRP).
Procalcitonin (PCT)Bacterial vs viral (more specific than CRP)less than 0.25 µg/L: Viral infection likely. 0.25-0.5 µg/L: Possible bacterial co-infection. > 0.5 µg/L: Bacterial infection likely. > 2 µg/L: Severe bacterial sepsis. Can guide antibiotic decisions (withhold if low, start if high).
LFTs (Liver Function Tests)Baseline, exclude hepatitisTransaminases (ALT/AST) may be mildly elevated (50-100 U/L) in influenza (cytokine effects, hypoxia). Severe elevation (> 500) suggests other pathology (drug-induced, viral hepatitis, ischaemic hepatitis).
GlucoseDiabetes, stress hyperglycaemiaMonitor in diabetics (hyperglycaemia common). Hypoglycaemia rare (sepsis, hepatic dysfunction). Stress hyperglycaemia (8-15 mmol/L) common even in non-diabetics.
LactateTissue perfusion, sepsisNormal less than 2 mmol/L. Lactate > 2 suggests tissue hypoperfusion (shock, sepsis, severe pneumonia). Lactate > 4 is severe (high mortality).
Blood CulturesIf sepsis suspected, before antibioticsPositive in 5-10% of influenza patients with bacterial superinfection (S. aureus, S. pneumoniae most common). Take 2 sets (different sites) before antibiotics.
Sputum CultureIf productive cough, bacterial pneumonia suspectedCulture and sensitivity for bacterial pathogens. Gram stain can provide rapid information (Gram-positive cocci in clusters = S. aureus; diplococci = S. pneumoniae). Quality specimen: > 25 WBC, less than 10 epithelial cells per low-power field.

Patients with Respiratory Symptoms / Hypoxia

TestIndicationInterpretation
Chest X-ray (CXR)Dyspnoea, hypoxia (SpO₂ less than 92%), suspected pneumonia, any abnormal chest examNormal in uncomplicated influenza (important to document). Bilateral interstitial infiltrates (reticular, ground-glass) = primary viral pneumonia. Lobar consolidation (dense, well-defined) = bacterial pneumonia. Patchy infiltrates = atypical pneumonia (Mycoplasma) or mixed viral-bacterial. Pleural effusion = bacterial (parapneumonic effusion/empyema).
Oxygen Saturation (SpO₂)All patients at presentation and ongoing≥95%: Normal. 92-94%: Mild hypoxia, monitor closely. less than 92%: Significant hypoxia → Oxygen therapy, admit. less than 88%: Severe hypoxia → High-flow oxygen, consider ICU.
ABG/VBG (Arterial/Venous Blood Gas)Severe respiratory distress, SpO₂ less than 90%, assess acid-base statusABG: PaO₂ less than 8 kPa (60 mmHg) on air = type 1 respiratory failure. PaCO₂ > 6 kPa (45 mmHg) = type 2 respiratory failure (ventilation failure). VBG: pH, lactate, electrolytes (quicker, less painful; cannot assess oxygenation).
CT Chest (High-Resolution)Severe pneumonia, ARDS, unclear CXR, suspected PEGround-glass opacities (bilateral, peripheral, lower lobe predominant) in viral pneumonia (COVID-19, influenza). Crazy-paving pattern (ground-glass + interlobular septal thickening) in severe viral pneumonia/ARDS. Consolidation in bacterial pneumonia. Better characterisation of disease extent, complications (abscess, empyema, PE).

ICU / Critically Ill Patients

  • Serial ABGs (4-6 hourly or continuous via arterial line): Monitor respiratory failure progression, guide ventilator settings, assess metabolic acidosis
  • Lactate (serial): Tissue perfusion marker, sepsis severity. Target less than 2 mmol/L.
  • Troponin (if myocarditis or MI suspected): Elevated in 10-20% of severe influenza (myocarditis, MI, type 2 MI from demand ischaemia)
  • BNP/NT-proBNP (if heart failure suspected): Distinguishes cardiogenic vs non-cardiogenic pulmonary oedema. > 400 pg/mL (BNP) or > 900 pg/mL (NT-proBNP) suggests cardiac cause.
  • Coagulation screen (PT, APTT, fibrinogen, D-dimer): DIC in severe sepsis (↑ PT/APTT, ↓ fibrinogen, ↑ D-dimer, ↓ platelets)
  • CK (Creatine Kinase) (if rhabdomyolysis suspected): Severe myalgia, dark urine, AKI. CK > 1000 U/L (normal less than 200) diagnostic. Treat with IV fluids.
  • Bronchoscopy with BAL (bronchoalveolar lavage) (if diagnosis uncertain, immunocompromised, treatment failure): Direct sampling of lower airway. Send for bacterial culture, fungal culture, viral PCR, Pneumocystis jirovecii PCR (if HIV/immunosuppressed). BAL more sensitive than upper airway swabs in intubated patients.
  • Echocardiography (if haemodynamic instability, myocarditis suspected): Assess LV function (myocarditis → global hypokinesis, ↓ ejection fraction), pericardial effusion, RV dysfunction (PE, ARDS)

Point-of-Care Tests (POC)

Advantages:

  • Rapid results (15-30 min) enable immediate clinical decision-making
  • Reduce unnecessary antibiotic use (if influenza confirmed and no bacterial features, avoid antibiotics)
  • Facilitate infection control measures (isolate influenza-positive patients, cohort nursing)
  • Improve antiviral prescribing (patients more likely to receive oseltamivir if rapid test positive)
  • Emergency Department utility: High (triage, disposition decisions)

Limitations:

  • Lower sensitivity than laboratory PCR (rapid antigen tests 50-70%, molecular POC 85-95% vs lab PCR 90-95%)
  • Operator-dependent (specimen collection quality critical)
  • More expensive per test (rapid molecular £30-50 vs lab PCR £20-30, though lab PCR has infrastructure costs)
  • Negative result does NOT exclude influenza (especially with rapid antigen tests)—clinical judgment and local epidemiology still required. If high clinical suspicion, treat as influenza regardless of negative rapid test.
  • False positives rare but occur (cross-reactivity, contamination)

Recommendation: In high-prevalence settings (winter, known influenza circulation), treat based on clinical diagnosis. POC testing most useful when result will change management (e.g., decide whether to start oseltamivir in borderline high-risk patient, or decide whether to discharge vs admit).


7. Management

Management Algorithm

         SUSPECTED INFLUENZA
         (Winter, Abrupt onset, Fever, Myalgia, Cough)
                       ↓
         ASSESS SEVERITY + RISK FACTORS
         - Respiratory distress? (RR > 20, SpO₂ less than 92%, dyspnoea, accessory muscles)
         - Dehydration? (Reduced intake, ↓ urine output, dry mucosa, ↑ urea)
         - Altered mental status? (Confusion, drowsiness—especially elderly)
         - High-risk group? (Age ≥65, pregnancy, chronic disease, immunocompromised, BMI ≥40)
         - Complications? (Pneumonia on exam/CXR, bacterial superinfection)
                       ↓
         SEVERITY STRATIFICATION
      ┌──────────────────┴──────────────────┐
   MILD/MODERATE                        SEVERE / HIGH-RISK / COMPLICATED
   (Healthy adults, no complications)   (Complications, high-risk, hypoxia, dehydration)
      ↓                                      ↓
   OUTPATIENT MANAGEMENT               ADMIT TO HOSPITAL
   - Supportive care                   - Oxygen therapy (target SpO₂ 94-98%, or 88-92% if COPD)
   - Antipyretics (paracetamol/ibuprofen)  - IV fluids (0.9% saline or Hartmann's, correct dehydration)
   - Rest, hydration (2-3L/day)        - Continuous monitoring (obs 4-hourly minimum, NEWS2 score)
   - Safety-netting (red flags)        - Neuraminidase inhibitors (oseltamivir 75mg BD × 5 days, start immediately)
   - Antivirals if high-risk AND less than 48h  - Investigations (FBC, U&E, CRP, CXR, influenza PCR, blood cultures if septic)
   - Avoid work/school 24-48h after    - Antibiotics if bacterial superinfection (co-amoxiclav ± clarithromycin)
     fever resolves                    - VTE prophylaxis (LMWH as per local protocol)
                                       - Consider ICU if severe hypoxia/shock/multi-organ failure

Admission Criteria

Consider Hospital Admission if:

Respiratory:

  • SpO₂ less than 92% on room air (or less than 88% if known COPD with chronic hypoxia)
  • Respiratory rate > 30/min (severe tachypnoea)
  • Respiratory distress (use of accessory muscles, intercostal recession, inability to speak in full sentences)
  • Suspected pneumonia (clinical or radiological)

Haemodynamic:

  • Systolic BP less than 90 mmHg (or > 40 mmHg drop from baseline)
  • Pulse > 125/min (severe tachycardia, not explained by fever alone)

Metabolic/Systemic:

  • Inability to maintain oral intake (vomiting, dysphagia, reduced conscious level)
  • Severe dehydration (clinical signs: dry mucosa, reduced skin turgor, oliguria, ↑ urea disproportionate to creatinine)
  • Altered mental status (confusion, drowsiness, delirium—especially elderly)
  • Temperature > 40°C (rarely, very high fever may warrant observation)

High-Risk Patient with Worsening Symptoms:

  • Age ≥65 years with clinical deterioration (even without severe parameters—lower threshold)
  • Pregnancy (any trimester) with concerning symptoms (dyspnoea, chest pain, reduced fetal movements)
  • Significant exacerbation of chronic disease (COPD, asthma, heart failure, diabetes with DKA/HHS)
  • Immunocompromised with suspected pneumonia or deterioration

Social Factors:

  • Unable to cope at home (lives alone, frail, inadequate support)
  • Inability to re-attend if deteriorates (transport issues, remote location)
  • Clinical concern (senior clinician gestalt—"does not look right")

NICE Pneumonia Severity Score (CURB-65) if Pneumonia Suspected:

  • Confusion (AMT ≤8 or new disorientation)
  • Urea > 7 mmol/L
  • Respiratory rate ≥30/min
  • Blood pressure (systolic less than 90 or diastolic ≤60)
  • 65 years or older
  • Score 0-1: Outpatient (mortality less than 3%)
  • Score 2: Consider admission (mortality 9%)
  • Score ≥3: Admit (mortality 15-40%), consider ICU

Supportive Care (All Patients)

InterventionRecommendationsNotes
RestStay home, avoid work/school for at least 24-48h after fever resolves (without antipyretics). Complete rest for 5-7 days.Reduces transmission risk. Returning too early delays recovery and risks relapse.
HydrationEncourage oral fluids (2-3 litres/day): Water, dilute juice, soup, rehydration salts. IV fluids if unable to drink, vomiting, or severely dehydrated (0.9% saline or Hartmann's solution, 1-2L over 4-6h, then reassess).Fever and reduced intake → Dehydration (↑ insensible losses from fever, tachypnoea). Dehydration worsens fatigue, headache, impairs immune function.
Antipyretics/AnalgesicsParacetamol 1g QDS (max 4g/24h) OR Ibuprofen 400mg TDS (max 1.2g/24h). Both equally effective for fever and myalgia. Can alternate if monotherapy insufficient (paracetamol 1g, then ibuprofen 400mg 3h later, then paracetamol 3h later, etc.).For fever, headache, myalgia. Fever is beneficial (↑ immune function, ↓ viral replication), but causes discomfort. Treat if > 38.5°C or patient distressed. Avoid ibuprofen if renal impairment, peptic ulcer, asthma (can worsen).
Avoid Aspirin in ChildrenDO NOT give aspirin to children/adolescents less than 18 years with viral illness (including influenza)Reye's Syndrome risk (acute encephalopathy + hepatic failure, 30% mortality). Rare but devastating. Use paracetamol or ibuprofen instead.
Humidified AirSteam inhalation (bowl of hot water, towel over head), humidifier, hot showerMay provide symptomatic relief for nasal congestion, dry cough. Evidence weak but harmless.
Throat LozengesMedicated (benzocaine, lidocaine) or non-medicated (honey, menthol)Sore throat relief. Honey (2 teaspoons) as effective as cough suppressants.
Cough SuppressantsGenerally not recommended (limited evidence, may delay clearance). Consider dextromethorphan or codeine linctus for distressing dry cough preventing sleep.Cough is protective (clears secretions). Suppression may increase pneumonia risk (theoretical). Honey, steam, hydration as effective.
AvoidAntibiotics (unless bacterial superinfection), corticosteroids (unless asthma/COPD exacerbation), decongestants (limited benefit, side effects: insomnia, tachycardia, hypertension)Antibiotics do not treat viral infection. Corticosteroids may prolong viral shedding (avoid in uncomplicated influenza).

Antiviral Therapy

Neuraminidase Inhibitors

DrugFormulationDose (Adults)DurationNotes
Oseltamivir (Tamiflu)Oral capsule (30mg, 45mg, 75mg), oral suspension (6mg/mL)75mg BD PO5 days (10 days in immunocompromised)FIRST-LINE. Start within 48h ideally (symptom benefit). Start regardless of timing if hospitalised/severe. Absorbed orally (75% bioavailability). Dose adjust in renal impairment.
Zanamivir (Relenza)Inhaled powder via Diskhaler (4 × 5mg blisters per dose)10mg (2 inhalations) BD5 daysAlternative if oseltamivir resistance/intolerance. Avoid in asthma/COPD (bronchospasm risk 15-20% in asthmatics). Minimal systemic absorption (5-20%). Not recommended in current respiratory distress (cannot inhale adequately).
Peramivir (Rapivab)Intravenous infusion600mg single dose IV (over 15-30 min)Single dose (can repeat daily in severe cases)For hospitalised patients unable to take oral/inhaled (intubated, severe vomiting, malabsorption). Not widely available in UK (available in USA, Japan). Single-dose convenient but less evidence than oseltamivir.

Oseltamivir Dose Adjustments:

IndicationDose
Standard (CrCl > 60 mL/min)75mg BD PO × 5 days
Renal Impairment CrCl 30-6030mg BD PO × 5 days
Renal Impairment CrCl 10-3030mg OD PO × 5 days
Renal Impairment CrCl less than 10 (ESRD on dialysis)30mg PO after each dialysis session (3 doses total for 5-day course if dialysis Mon/Wed/Fri)
CRRT (Continuous Renal Replacement Therapy)75mg OD (removed by haemofiltration)
Pregnancy75mg BD PO × 5 days (standard dose—safe, strongly recommended)
Obesity (BMI > 40)75mg BD (standard dose adequate; some advocate 150mg BD but limited evidence, not routinely recommended)
Children (age-based dosing)See paediatric guidelines (weight-based: 3 mg/kg BD if less than 1 year; age-stratified if > 1 year)
Prophylaxis75mg OD PO × 10 days (post-exposure) or duration of outbreak

Failure to adjust dosing in renal impairment: Drug accumulation → Neuropsychiatric adverse effects (delirium, hallucinations, abnormal behaviour, especially in children/adolescents). Always calculate CrCl (Cockcroft-Gault equation) before prescribing.

Cap-Dependent Endonuclease Inhibitor

DrugFormulationDose (Adults)DurationNotes
Baloxavir marboxil (Xofluza)Oral tablet (20mg, 40mg)40mg single dose (if 40-79kg) OR 80mg single dose (if ≥80kg)Single doseNovel mechanism (inhibits PA endonuclease subunit of viral polymerase → prevents cap-snatching → no viral mRNA). Licensed in UK/USA/Japan. Single dose convenient (compliance). Resistance emergence in 10-15% (PA I38T/M mutation, especially H3N2). Limited data in high-risk groups (pregnancy, immunocompromised). Not routinely recommended in UK (oseltamivir preferred).

When to Give Antivirals: Evidence-Based Indications

TREAT (Regardless of Symptom Duration, Even if > 48h)

  1. All hospitalised patients with confirmed or suspected influenza (do not wait for test results—start empirically)
  2. Severe or progressive illness at any stage (worsening dyspnoea, hypoxia, confusion, haemodynamic instability)
  3. Pneumonia or lower respiratory tract involvement (clinical or radiological)
  4. ICU admission for influenza complications (ARDS, shock)
  5. Immunocompromised patients (any severity, start immediately)

Rationale: Mortality benefit persists even if started > 48h in severe disease. [10]

TREAT (If Within 48 Hours of Symptom Onset AND High-Risk)

High-Risk Outpatients (UK NICE / PHE Guidance):

  • Age ≥65 years
  • Pregnancy (any trimester) or up to 2 weeks postpartum
  • Chronic respiratory disease (asthma requiring inhaled steroids, COPD, bronchiectasis, ILD, cystic fibrosis)
  • Chronic cardiac disease (CHF, IHD, congenital heart disease, valvular disease)
  • Diabetes mellitus (type 1 or 2)
  • Chronic kidney disease (CKD 3-5, eGFR less than 60, dialysis, nephrotic syndrome)
  • Chronic liver disease (cirrhosis, chronic hepatitis)
  • Chronic neurological disease (stroke, TIA, dementia, Parkinson's, MS, MND, cerebral palsy, epilepsy, learning disabilities)
  • Immunosuppression (HIV, chemotherapy, transplant, biologics, corticosteroids > 20mg/day for > 2 weeks, asplenia)
  • Severe obesity (BMI ≥40 kg/m²)
  • Residents of care homes or long-stay facilities
  • Haematological malignancy

Rationale: Oseltamivir started within 48h reduces symptom duration by 1 day, complications by 25-44%, and mortality in high-risk patients. [9,10]

DO NOT ROUTINELY TREAT

  • Healthy adults (less than 65 years, no comorbidities) with uncomplicated influenza
  • Mild illness in low-risk individuals (though can offer if patient requests and within 48h)
  • Rationale: Antivirals reduce symptom duration by approximately 16-21 hours (1 day) in this group. Modest benefit. Self-limiting illness. Cost-effectiveness concerns (£20-30 per course). Number needed to treat (NNT) to prevent 1 day of symptoms: ~15. Most healthy adults prefer to avoid medication for marginal benefit.

Clinical Judgment: Shared decision-making. Some healthy adults may choose antiviral for faster return to work (e.g., healthcare worker, critical job role). Offer information, patient decides.

Evidence for Antiviral Efficacy

Oseltamivir (Meta-Analyses and RCTs): [9,10,20]

  • Reduces symptom duration by 16-21 hours (95% CI 8-31h) if started within 48h in healthy adults (NNT ~15)
  • Reduces symptom duration by ~26 hours in high-risk patients
  • Reduces complications (pneumonia, hospitalisation, sinusitis, otitis media) by 25-44% in high-risk patients (NNT ~18)
  • Reduces mortality in hospitalised patients by approximately 25% (OR 0.75, 95% CI 0.66-0.86; NNT ~55) [10]
  • Reduces ICU admission by 30-40%
  • No benefit for symptom duration if started > 48h in uncomplicated illness, BUT mortality benefit persists in severe disease regardless of timing (start even if > 48h in hospitalised patients)
  • Well tolerated: nausea/vomiting most common (5-10%, usually mild, take with food to reduce)

Zanamivir:

  • Similar efficacy to oseltamivir for symptom reduction (1-day reduction)
  • May have lower resistance rates (no H275Y-equivalent mutation widely reported)
  • Bronchospasm risk limits use in respiratory disease patients (15-20% of asthmatics develop bronchospasm)
  • Inhaled delivery less convenient (especially in acutely ill, children, elderly)

Baloxavir:

  • Reduces symptom duration by 24-48 hours (1-2 days) in phase 3 trials (similar to oseltamivir)
  • More rapid viral load reduction than oseltamivir (median 24h vs 72h to undetectable virus)
  • Single dose more convenient (improves compliance vs 5-day oseltamivir course)
  • Resistance emergence in 10-15% during treatment (PA I38T/M mutation), especially H3N2 (23% resistance in one trial). Clinical significance unclear (resistant viruses still cleared, symptoms resolved, but concerns about transmission of resistant virus).
  • Limited data in high-risk groups (pregnant, immunocompromised, elderly)
  • More expensive (£50-100 per course vs £20-30 oseltamivir)
  • Not routinely recommended in UK (oseltamivir remains first-line)

Antiviral Resistance

Drug ClassMechanismPrevalenceClinical Impact
Adamantanes (Amantadine, Rimantadine)M2 protein S31N mutation (> 95% of H1N1 and H3N2 globally)> 95% of circulating strainsNot recommended—obsolete due to widespread resistance. Removed from guidelines 2006-2009. No role in current practice.
OseltamivirNeuraminidase H275Y mutation (N1 subtype), R292K mutation (N2 subtype)less than 2% globally in seasonal strains (2010-2025 surveillance). Higher in immunocompromised (5-10% develop resistance during prolonged shedding). Rare de novo resistance.Generally low concern for routine use. Monitor in immunocompromised (consider extended therapy, combination therapy, or zanamivir if resistance detected). 2007-2008: Transient H275Y emergence in seasonal H1N1 (> 95% resistant), but this strain replaced by 2009 H1N1pdm09 (oseltamivir-sensitive).
ZanamivirNeuraminidase mutations (rare, E119V, R292K)less than 1% (very rare)Alternative if oseltamivir resistance detected. Cross-resistance uncommon (different binding sites in NA active site).
BaloxavirPA I38T/M mutation (polymerase acidic subunit)10-15% (treatment-emergent in clinical trials). More common in H3N2 (23%) than H1N1 (9%). Higher in children (23%).Emerging concern. Resistant viruses: (1) Retain fitness (transmit efficiently), (2) Show reduced susceptibility (10-100× higher IC50), (3) Associated with viral rebound in some patients, (4) Clinical significance unclear (most patients still resolve symptoms, but resistance may limit drug utility). Ongoing surveillance critical.

Key Point: Resistance more likely in:

  • Immunocompromised patients (prolonged viral replication provides selection pressure, subtherapeutic drug levels in some compartments)
  • Patients receiving suboptimal dosing (renal impairment without dose adjustment → excessive levels; under-dosing → resistance emergence)
  • Children (higher viral loads, longer shedding, more prone to resistance with baloxavir)
  • Specific subtypes: H1N1 (H275Y oseltamivir resistance), H3N2 (baloxavir I38T resistance)

Antibiotic Therapy

Antibiotics are NOT indicated for uncomplicated influenza (viral infection). Inappropriate antibiotic use contributes to resistance, adverse effects (allergy, C. difficile), and unnecessary cost.

Indications for Antibiotics:

1. Suspected Secondary Bacterial Pneumonia

Clinical Features:

  • Clinical deterioration after initial improvement ("biphasic illness"—pathognomonic, days 3-7)
  • New productive cough with purulent sputum (green/yellow/brown, increased volume)
  • New focal chest signs (crackles, bronchial breathing, dullness to percussion) or consolidation on CXR
  • High fever (> 38.5°C) persisting > 5-7 days or recurrent after initial resolution
  • Pleuritic chest pain (suggests pneumococcal pneumonia)
  • Haemoptysis (suggests S. aureus necrotising pneumonia)
  • Elevated inflammatory markers: WCC > 15 × 10⁹/L (neutrophilia), CRP > 100 mg/L, procalcitonin > 0.5 µg/L

2. Empirical Antibiotic Regimens (Community-Acquired Pneumonia Post-Influenza)

Outpatient (Mild-Moderate, CRB-65 Score 0-1):

  • First-line: Co-amoxiclav 625mg TDS PO × 5-7 days (covers S. pneumoniae, H. influenzae, S. aureus)
  • Penicillin allergy: Doxycycline 200mg loading dose, then 100mg OD PO × 5-7 days (or Levofloxacin 500mg OD if severe allergy)
  • Add if atypical suspected (Mycoplasma, Legionella): Clarithromycin 500mg BD PO × 7 days

Inpatient (Moderate-Severe, CRB-65 Score ≥2):

  • First-line: Co-amoxiclav 1.2g TDS IV + Clarithromycin 500mg BD IV/PO × 7-10 days
  • Penicillin allergy: Levofloxacin 500mg BD IV × 7-10 days (respiratory fluoroquinolone, broad cover including atypicals)
  • Cover for S. aureus if necrotising pneumonia (cavitation on CXR, haemoptysis, rapid progression, MRSA risk factors): Add Flucloxacillin 2g QDS IV (or Vancomycin 15-20mg/kg BD IV if MRSA risk or penicillin allergy; target trough 15-20 mg/L)

ICU (Severe Pneumonia, Septic Shock):

  • Broad-spectrum: Piperacillin-tazobactam 4.5g TDS IV + Clarithromycin 500mg BD IV
  • MRSA cover: Add Vancomycin or Linezolid 600mg BD IV
  • De-escalate based on culture results and clinical response

Duration:

  • Oral: 5-7 days (uncomplicated)
  • IV: 7-10 days (severe, initially IV then switch to oral once improving, afebrile 24-48h, able to tolerate oral)

3. Pathogens in Post-Influenza Bacterial Pneumonia

PathogenFrequencyClinical FeaturesAntibiotic
Streptococcus pneumoniae30-40% (most common)Lobar consolidation on CXR, rusty sputum, pleuritic chest pain. Gram-positive diplococci. Urinary antigen positive (70% sensitivity).Amoxicillin, co-amoxiclav. Penicillin-resistant strains rare in UK (less than 5%).
Staphylococcus aureus (MSSA and MRSA)20-30% (increasing)Necrotising pneumonia, cavitation, lung abscesses, haemoptysis. Rapid progression. High mortality (30-50%). Empyema common. Gram-positive cocci in clusters.MSSA: Flucloxacillin. MRSA: Vancomycin or linezolid.
Haemophilus influenzae10-20%Bronchopneumonia pattern (patchy infiltrates). Gram-negative coccobacilli.Co-amoxiclav (β-lactamase production in 15-20%, so amoxicillin alone may fail).
Group A Streptococcus (S. pyogenes)Rare but severeSevere pneumonia, empyema, necrotising fasciitis. Streptococcal toxic shock syndrome (TSS). High mortality.Penicillin (high-dose) + clindamycin (toxin suppression).
Atypicals (Mycoplasma, Legionella, Chlamydia)Occasional co-infectionAtypical pneumonia pattern. Extrapulmonary features (GI, CNS, rash).Macrolides (clarithromycin, azithromycin) or fluoroquinolones (levofloxacin).

Key Point: Staphylococcus aureus post-influenza pneumonia is particularly devastating (necrotising, cavitation, high mortality). Have high index of suspicion if haemoptysis, rapid deterioration, cavitation on imaging. Start anti-staphylococcal therapy early (flucloxacillin or vancomycin).

Other Pharmacological Therapies

InterventionIndicationDose/RegimenNotes
BronchodilatorsAsthma/COPD exacerbationSalbutamol 2.5-5mg nebulised QDS or 100-200mcg MDI 4-6 puffs QDS. Ipratropium 500mcg nebulised QDS (add if inadequate response to salbutamol alone).Short-acting β-agonists first-line. Add anticholinergic if severe.
CorticosteroidsAsthma/COPD exacerbation (NOT uncomplicated influenza)Prednisolone 30-40mg OD PO × 5-7 days (asthma/COPD). Hydrocortisone 100mg QDS IV if unable to take oral.Beneficial in asthma/COPD exacerbations. AVOID in uncomplicated influenza (may prolong viral shedding, no benefit, possible harm).
Oxygen TherapySpO₂ less than 92% on air (or less than 88% if COPD with chronic hypoxia)Target SpO₂ 94-98% (healthy individuals) or 88-92% (COPD, risk of CO₂ retention). Start with nasal cannula 2-4L/min or simple face mask 5-10L/min. Titrate to target.Monitor ABG if COPD (risk of hypercapnia with high-flow oxygen). Venturi masks for precise FiO₂ in COPD.
High-Flow Nasal Oxygen (HFNO)Hypoxic respiratory failure (SpO₂ less than 90% despite standard oxygen), pre-intubationFiO₂ 40-100%, flow rates 30-60 L/min, heated and humidifiedMore comfortable than NIV, better oxygenation than standard oxygen. May delay/prevent intubation.
Non-Invasive Ventilation (NIV)Type 2 respiratory failure in COPD (pH 7.25-7.35, PaCO₂ > 6 kPa)BiPAP: IPAP 12-20 cmH₂O, EPAP 4-8 cmH₂O. Titrate based on ABG.NOT first-line in influenza pneumonia (↑ aerosolisation risk, less effective in hypoxic failure). Useful in COPD with hypercapnia.
Mechanical VentilationRefractory hypoxia (PaO₂ less than 8 kPa on FiO₂ > 60%), respiratory exhaustion, deteriorating pH despite NIVARDS protocol: Low tidal volumes (6 mL/kg ideal body weight), plateau pressure less than 30 cmH₂O, PEEP 10-15 cmH₂O, lung-protective ventilationICU. Prone positioning if severe ARDS (PaO₂/FiO₂ less than 150). ECMO if refractory (PaO₂/FiO₂ less than 80 despite optimisation).
Anticoagulation (VTE Prophylaxis)All hospitalised patients (unless contraindicated)LMWH (enoxaparin 40mg SC OD, or dalteparin 5000 units SC OD). Dose adjust for renal impairment and extremes of weight.Influenza increases VTE risk (inflammation, immobilisation, dehydration). Prophylaxis reduces DVT/PE. Continue until mobile.
Intravenous FluidsDehydration, unable to maintain oral intake, hypotension0.9% saline or Hartmann's solution. Initial bolus 500mL-1L over 15-30 min if hypotensive, then maintenance 1-2L over 24h (adjust to urine output, fluid balance). Add potassium if hypokalaemic.Correct dehydration, maintain organ perfusion. Monitor fluid balance (risk of pulmonary oedema if aggressive fluids in pneumonia/ARDS).

Management of Specific Complications

Primary Viral Pneumonia / ARDS

  • ICU admission (high mortality 30-50%, requires organ support)
  • Mechanical ventilation (may require early intubation—do not delay if hypoxia worsening despite high-flow oxygen)
  • ARDS-protocol ventilation: Low tidal volumes (6 mL/kg ideal body weight), plateau pressure less than 30 cmH₂O, PEEP 10-15 cmH₂O, FiO₂ titrated to SpO₂ 88-95%, permissive hypercapnia (pH > 7.2 acceptable)
  • Oseltamivir (standard dose 75mg BD, though some use higher dose 150mg BD in severe cases—no evidence, but theoretical benefit from animal models; not routinely recommended)
  • Prone positioning if severe ARDS (PaO₂/FiO₂ less than 150 mmHg; 12-16 hours per day; improves oxygenation and mortality)
  • ECMO (Extracorporeal Membrane Oxygenation) in refractory cases (PaO₂/FiO₂ less than 80 despite optimisation, or pH less than 7.2 despite ventilation; transfer to ECMO centre; mortality 40-60% but survival better than without ECMO in selected patients)
  • Empirical antibiotics (difficult to exclude bacterial co-infection clinically; most clinicians give co-amoxiclav + clarithromycin even if suspected pure viral)
  • Avoid high-dose corticosteroids (no benefit in influenza ARDS, may prolong viral shedding; controversial—some centres use methylprednisolone 1mg/kg/day if refractory ARDS, but evidence limited)

Secondary Bacterial Pneumonia

  • Antibiotics as above (co-amoxiclav ± clarithromycin, add flucloxacillin/vancomycin if necrotising/S. aureus suspected)
  • Drainage if empyema develops (chest drain insertion, CT-guided if loculated, surgical referral if failed medical management)
  • May require ICU support if severe (septic shock, respiratory failure)
  • Source control: Consider bronchoscopy if lung abscess (rare), surgical debridement if necrotising (very rare)

Myocarditis

  • Supportive care (bed rest, monitor telemetry for arrhythmias)
  • Treat heart failure if develops: Diuretics (furosemide), ACE-inhibitor (ramipril, after acute phase), beta-blocker (bisoprolol, after acute phase, start low dose)
  • Avoid exertion for 3-6 months (risk of arrhythmias, sudden cardiac death with exertion during myocarditis recovery)
  • Monitor: Troponin (serial, should downtrend), ECG (watch for arrhythmias, conduction abnormalities), echocardiography (assess LV function—usually global hypokinesis, reduced EF; repeat at 3-6 months to assess recovery)
  • Consider immunosuppression if biopsy-proven giant cell myocarditis or fulminant (rare, specialist cardiology decision)
  • Cardiac MRI if diagnosis uncertain (late gadolinium enhancement, myocardial oedema)

Exacerbation of Chronic Disease

  • Optimise management of underlying condition:
    • "Asthma/COPD: Increase bronchodilators (salbutamol, ipratropium), add corticosteroids (prednisolone 30-40mg OD × 5-7 days), consider antibiotics if purulent sputum (doxycycline, co-amoxiclav). Oxygen if hypoxic (target SpO₂ 88-92% in COPD). NIV if type 2 respiratory failure."
    • "Heart failure: Diuretics (furosemide 40-80mg IV/PO, increase dose if insufficient diuresis), vasodilators (GTN infusion if pulmonary oedema, ACE-inhibitor/ARB once stable), oxygen therapy, fluid restriction, daily weights, strict fluid balance."
    • "Diabetes: Increase insulin doses (typically 20-50% increase during acute illness), check blood glucose 4-6 hourly, check ketones if glucose > 15 mmol/L (urine or blood), IV fluids if dehydrated, treat DKA/HHS if develops (fixed-rate insulin infusion, aggressive IV fluids, potassium replacement, treat underlying infection)."

Infection Control Measures

Standard Precautions (All Healthcare Settings)

Hand Hygiene:

  • Alcohol gel (60-90% alcohol) before and after patient contact (if hands not visibly soiled)
  • Soap and water if hands visibly soiled or after high-risk procedures
  • 5 Moments of Hand Hygiene: (1) Before patient contact, (2) Before aseptic task, (3) After body fluid exposure, (4) After patient contact, (5) After contact with patient surroundings

Personal Protective Equipment (PPE):

  • Surgical mask (Type IIR, fluid-resistant) when within 1-2 metres of patient
  • Gloves for direct patient contact (change between patients)
  • Apron for direct patient contact
  • Eye protection (goggles or face shield) if risk of splashes (suctioning, vomiting, coughing patient)
  • FFP3 mask (N95 equivalent, fit-tested) for aerosol-generating procedures (intubation, extubation, bronchoscopy, open suctioning, manual ventilation, NIV/CPAP, high-flow nasal oxygen > 30L/min, nebulisers, CPR)

Isolation:

  • Single room preferred (negative pressure if available, though not required for droplet precautions—reserve for aerosol-generating procedures)
  • Cohort influenza patients together if single rooms unavailable (separate from other respiratory infections like COVID-19, RSV)
  • Duration: Until 24-48 hours after fever resolves (without antipyretics) AND minimum 5 days from symptom onset. Immunocompromised: Extended isolation until 2 consecutive negative PCRs 24h apart (may be weeks).

Droplet vs Aerosol Transmission:

  • Influenza primarily spread by droplets (> 5µm diameter, travel less than 1-2 metres, fall to ground quickly)—hence surgical masks and 1-2m distance sufficient for standard care
  • Aerosol-generating procedures (AGPs) produce smaller particles (less than 5µm, remain airborne, travel > 2m)—require FFP3 masks, negative-pressure room, limit personnel present
  • Controversial: Some evidence influenza can transmit via aerosols in enclosed spaces (schools, aircraft), but healthcare droplet precautions have proven effective

Healthcare Worker Considerations

  • Vaccinate annually (ethical duty, protects staff and patients)—mandated in many jurisdictions (e.g., some US states require vaccination or mask-wearing for unvaccinated HCWs during influenza season)
  • Exclude from work if symptomatic (fever, cough, influenza-like illness)—return after 24-48h fever-free (without antipyretics) AND able to perform duties
  • Antiviral prophylaxis may be offered to unvaccinated staff during outbreaks (oseltamivir 75mg OD × 10 days post-exposure, or duration of outbreak)—but vaccination preferred
  • Fit-test FFP3 masks annually (quantitative or qualitative fit-testing to ensure adequate seal)—required for AGPs
  • Monitor HCW infection rates (occupational health surveillance)—high rates may indicate breakdown in infection control, need for intervention

Outbreak Control (Hospitals, Care Homes)

  • Declare outbreak if ≥2 linked cases within 7 days (PHE/UKHSA notification)
  • Restrict admissions to affected ward (new admissions only if essential)
  • Restrict movements (patients stay in bay/room, no communal activities)
  • Restrict visitors (essential visits only, provide PPE education)
  • Antiviral prophylaxis for all residents/patients and staff on affected ward (oseltamivir 75mg OD × duration of outbreak)
  • Enhanced cleaning (daily terminal clean of affected areas, focus on high-touch surfaces)
  • Staff cohorting (dedicated staff for outbreak ward, do not rotate to other wards)
  • Close ward if outbreak uncontrolled (no new admissions until 7 days after last case)

8. Complications

Respiratory Complications

ComplicationIncidencePathophysiologyFeaturesManagement
Primary Viral Pneumonia1-5% of hospitalised patientsDirect viral damage to alveolar epithelium → Diffuse alveolar damage (DAD) → Type I pneumocyte necrosis → Hyaline membrane formation → ARDS. Cytokine storm amplifies damage.Rapid progression (24-48h post-onset), severe hypoxia (SpO₂ less than 88%), bilateral interstitial infiltrates on CXR (ground-glass on CT), poor response to antibiotics. More common with H1N1pdm09, pregnancy, obesity, immunosuppression.ICU admission, early mechanical ventilation (ARDS protocol: VT 6mL/kg IBW, plateau pressure less than 30cmH₂O, PEEP 10-15), oseltamivir 75mg BD (some use 150mg BD severe cases, no evidence), prone positioning if P/F ratio less than 150, empirical antibiotics (co-amoxiclav + clarithromycin), ECMO if refractory (P/F less than 80). Mortality 30-50%.
Secondary Bacterial Pneumonia10-30% of hospitalised patients(1) Loss of ciliated epithelium → Impaired mucociliary clearance. (2) Influenza NA enhances bacterial adhesion (S. aureus, S. pneumoniae). (3) Immune dysregulation (↓ neutrophil function, ↑ IL-10). (4) Upregulation of bacterial receptors (PAF-R for pneumococcus).Biphasic illness (pathognomonic): Initial improvement day 3-5, then clinical deterioration day 5-7. New fever (> 38.5°C), productive cough (purulent sputum), focal chest signs (crackles, bronchial breathing, dullness), lobar consolidation on CXR. Elevated WCC (neutrophilia > 15), CRP > 100, PCT > 0.5.Antibiotics: Co-amoxiclav 1.2g TDS IV + clarithromycin 500mg BD IV (empirical cover for S. pneumoniae, H. influenzae, S. aureus, atypicals). Add flucloxacillin 2g QDS IV (or vancomycin 15-20mg/kg BD IV if MRSA risk) if necrotising features (cavitation, haemoptysis, rapid deterioration). Blood and sputum cultures. Chest drain if empyema. ICU if septic shock. Duration 7-10 days IV, then switch to oral when improving.
ARDS (Acute Respiratory Distress Syndrome)5-10% of ICU patients with influenza pneumoniaSevere viral pneumonia or bacterial superinfection → Diffuse alveolar damage → Increased alveolar-capillary permeability → Pulmonary oedema (non-cardiogenic), hyaline membranes, impaired gas exchange.Berlin Criteria: (1) Acute onset (less than 1 week), (2) Bilateral infiltrates on CXR/CT, (3) Not explained by cardiac failure (BNP normal or pulmonary artery catheter), (4) Hypoxia: Mild P/F 200-300, Moderate 100-200, Severe less than 100. Refractory hypoxia despite high FiO₂ and PEEP.ICU. Mechanical ventilation: Lung-protective strategy (VT 6mL/kg IBW, plateau pressure less than 30cmH₂O, PEEP 10-20cmH₂O titrated to oxygenation, permissive hypercapnia pH > 7.2). Prone positioning 12-16h/day if P/F less than 150 (↓ mortality 50% in severe ARDS). Neuromuscular blockade first 48h if P/F less than 150. Conservative fluid strategy (avoid fluid overload, furosemide). ECMO if refractory despite optimisation (P/F less than 80, pH less than 7.2, unable to ventilate safely). Treat underlying cause (oseltamivir, antibiotics). Avoid corticosteroids in influenza ARDS (no benefit, may prolong shedding; controversial).
Exacerbation of Asthma30-50% of asthmatics with influenzaViral replication in airway epithelium → Inflammation, cytokine release (IL-4, IL-5, IL-13) → Bronchospasm, mucus hypersecretion, airway oedema. Triggers Th2 response.Increased wheeze, dyspnoea, chest tightness, cough (worse at night), reduced PEFR (less than 80% predicted or personal best), accessory muscle use, difficulty speaking in full sentences. Silent chest if severe (life-threatening).Bronchodilators: Salbutamol 2.5-5mg nebulised QDS (or 4-6 puffs MDI + spacer QDS), add ipratropium 500mcg nebulised QDS if inadequate response. Corticosteroids: Prednisolone 40-50mg OD PO × 5-7 days (hydrocortisone 100mg QDS IV if unable to take oral or life-threatening). Oxygen if SpO₂ less than 92% (target 94-98%). Magnesium sulphate 2g IV over 20min if severe (no response to initial bronchodilators). ICU if deteriorating (consider aminophylline infusion, intubation). Monitor PEFR. Safety-net (increase preventer inhaler dose after recovery).
Exacerbation of COPD40-60% of COPD patients with influenzaViral inflammation → ↑ Mucus production, bronchospasm, ↑ dyspnoea. Bacterial superinfection common (impaired clearance mechanisms).Increased dyspnoea (from baseline), increased sputum volume/purulence (green/yellow), wheeze, use of accessory muscles, pursed-lip breathing, hypoxia (SpO₂ less than 88%), hypercapnia (PaCO₂ > 6 kPa, pH less than 7.35).Bronchodilators: Salbutamol + ipratropium nebulised QDS. Corticosteroids: Prednisolone 30mg OD × 5-7 days. Oxygen: Target SpO₂ 88-92% (controlled oxygen, risk of CO₂ retention). Venturi mask (24-28% FiO₂). Monitor ABG 30-60min after starting oxygen. NIV (Non-Invasive Ventilation) if type 2 respiratory failure (pH 7.25-7.35, PaCO₂ > 6 kPa despite controlled oxygen): BiPAP IPAP 12-20, EPAP 4-8cmH₂O. Antibiotics if ↑ sputum purulence (doxycycline 200mg loading then 100mg OD, or co-amoxiclav 625mg TDS × 5 days). Physiotherapy (sputum clearance). Admit if pH less than 7.35, severe hypoxia, inability to cope at home.
Acute BronchitisVery common (50-70% of influenza patients)Viral infection of bronchial epithelium → Inflammation, mucus hypersecretion. Usually self-limiting.Productive cough (may be persistent, 2-3 weeks duration), purulent sputum (yellow/green), chest discomfort (retrosternal), no focal chest signs, CXR normal.Supportive care only. Rest, hydration, honey (2 teaspoons, as effective as cough suppressants), paracetamol for discomfort. Antibiotics NOT indicated (viral, not bacterial—antibiotics do not shorten duration or improve symptoms). Advise cough may persist 2-3 weeks (normal). Safety-net if develops dyspnoea, high fever > 5 days, haemoptysis (suggests pneumonia).
Otitis Media5-10% adults (more common in children 20-30%)Eustachian tube dysfunction (viral inflammation + oedema) → Middle ear effusion → Bacterial superinfection (S. pneumoniae, H. influenzae, M. catarrhalis).Ear pain (otalgia), feeling of fullness, reduced hearing, fever. Otoscopy: Bulging, erythematous tympanic membrane, loss of light reflex, purulent discharge if perforated.Analgesia: Paracetamol, ibuprofen. Observe 48-72h (many resolve spontaneously). Antibiotics if severe pain, systemically unwell, or not improving after 3 days: Amoxicillin 500mg TDS × 5-7 days (or erythromycin if penicillin allergy). Refer ENT if recurrent (> 4 episodes/year) or complications (mastoiditis, intracranial).
Acute Sinusitis5-10%Viral inflammation → Sinus ostia obstruction → Mucus stasis → Bacterial superinfection (S. pneumoniae, H. influenzae, M. catarrhalis).Facial pain/pressure (worse on bending forward), purulent nasal discharge (> 10 days), nasal congestion, post-nasal drip, hyposmia, maxillary tooth pain. Fever if bacterial. Tenderness over affected sinus.Conservative: Intranasal corticosteroids (fluticasone 2 sprays each nostril BD), nasal saline irrigation, analgesia, decongestants (xylometazoline spray, max 5 days—rebound congestion). Antibiotics if severe or not improving after 10 days: Co-amoxiclav 625mg TDS × 7 days (or doxycycline if penicillin allergy). Refer ENT if complications (orbital cellulitis, intracranial extension—rare).

Cardiovascular Complications

ComplicationIncidenceMechanismFeaturesManagement
Myocardial Infarction (MI)6-10× increased risk in week post-influenza infection [17](1) Systemic inflammation (↑ IL-6, TNF-α, CRP) → Plaque instability, rupture → Coronary thrombosis. (2) ↑ Oxygen demand (fever, tachycardia) + ↑ myocardial work → Type 2 MI (demand ischaemia). (3) Hypercoagulable state (↑ platelet activation, ↑ fibrinogen, ↑ factor VIII). (4) Endothelial dysfunction.Chest pain (central, crushing, radiating to left arm/jaw), dyspnoea, diaphoresis, nausea. ECG changes (ST elevation, ST depression, T wave inversion, new LBBB). Elevated troponin (rises 3-6h post-onset, peaks 12-24h).Immediate: Aspirin 300mg chewed, clopidogrel 300mg (or ticagrelor 180mg), morphine 5-10mg IV, oxygen if SpO₂ less than 94%, GTN spray 2 puffs SL. Cardiology referral: STEMI: Primary PCI within 120min (or thrombolysis if PCI unavailable). NSTEMI: Risk stratify (GRACE score), consider early invasive strategy if high-risk. Secondary prevention: Dual antiplatelet (aspirin + P2Y12 inhibitor 12 months), statin (atorvastatin 80mg), ACE-inhibitor, beta-blocker. Influenza vaccination reduces MI risk 15-45% (important preventive measure). [17]
MyocarditisRare (less than 1% of influenza patients; 5-10% of severe cases at autopsy)(1) Direct viral invasion of myocardium (virus detected by PCR in myocardial tissue). (2) Immune-mediated damage (cytotoxic T cells, antibodies cross-react with cardiac myosin—molecular mimicry). (3) Cytokine-mediated (TNF-α, IL-1β cardiotoxic).Chest pain (pleuritic or dull, retrosternal), dyspnoea, fatigue, palpitations (arrhythmias), signs of heart failure (↑ JVP, pulmonary oedema, peripheral oedema). ECG: ST elevation (diffuse, concave), T wave inversion, PR depression, arrhythmias (AF, VT, heart block). Elevated troponin (sensitive marker), elevated BNP. Echocardiography: Global hypokinesis (vs regional in MI), ↓ ejection fraction (may be severely reduced less than 30%), wall motion abnormalities. Cardiac MRI: Late gadolinium enhancement (mid-wall, subepicardial pattern), myocardial oedema (T2-weighted hyperintensity).Supportive care: Bed rest (strict, risk of arrhythmias with exertion). Treat heart failure: Diuretics (furosemide 40-80mg OD, titrate to symptoms), ACE-inhibitor (ramipril 2.5-10mg OD, start after acute phase), beta-blocker (bisoprolol 1.25-10mg OD, start after acute phase, improves outcomes). Monitor: Continuous telemetry (watch for arrhythmias—VT, complete heart block, require urgent treatment). Serial troponin (should downtrend), serial ECG, repeat echo at 3-6 months (assess recovery). Avoid exertion for 3-6 months (European Society of Cardiology recommendation—risk of sudden cardiac death). Immunosuppression (corticosteroids, IVIG) only if biopsy-proven giant cell myocarditis or fulminant (very rare, specialist decision). Prognosis: Variable. Fulminant myocarditis paradoxically better prognosis (complete recovery 90% if survive acute phase). Non-fulminant: 40-60% full recovery, 20-30% chronic dilated cardiomyopathy, 10-20% death or transplant.
PericarditisRare (0.1-0.5%)Viral infection of pericardium or immune-mediated inflammation. Often co-exists with myocarditis ("myopericarditis").Sharp, pleuritic chest pain (worse lying flat, improved sitting forward), pericardial friction rub (scratchy, triphasic sound; best heard left sternal edge, leaning forward), ECG: Saddle-shaped ST elevation (widespread, concave upwards), PR depression. Pericardial effusion on echo (may be absent).NSAIDs: Ibuprofen 600mg TDS (or aspirin 750mg QDS) × 1-2 weeks (anti-inflammatory). Colchicine: 500mcg BD × 3 months (↓ recurrence risk 50%). Restrict exertion. Avoid corticosteroids unless refractory (↑ recurrence risk). Monitor for tamponade if large effusion (Beck's triad: hypotension, ↑ JVP, muffled heart sounds; pulsus paradoxus > 10mmHg; echo shows RV collapse). Pericardiocentesis if tamponade (echo-guided).
Exacerbation of Heart FailureCommon in CHF patients (30-40% decompensation during acute influenza)(1) ↑ Oxygen demand (fever, tachycardia) → ↑ cardiac workload. (2) Fluid retention (systemic inflammation, cytokines → ADH/RAAS activation). (3) Arrhythmias (AF common, worsens heart failure). (4) Myocardial ischaemia.Worsening dyspnoea (orthopnoea, PND), peripheral oedema (ankles, sacrum), ↑ JVP, pulmonary oedema (bibasal crackles, dullness to percussion), S3 gallop. CXR: Cardiomegaly, upper lobe blood diversion, Kerley B lines, pleural effusions, bat's wing perihilar shadowing. BNP > 400 pg/mL (or NT-proBNP > 900 pg/mL).Diuretics: Furosemide 40-80mg IV/PO (increase dose if insufficient diuresis; aim urine output > 0.5mL/kg/h). Daily weights. Strict fluid balance (restrict to 1.5L/day). Vasodilators: GTN infusion 1-10mg/h if pulmonary oedema (↓ preload). ACE-inhibitor/ARB (continue if taking, may need temporary dose reduction if hypotensive). Oxygen: Target SpO₂ 94-98%. Sit upright (↓ venous return). Monitor U&Es (risk of AKI with diuretics, adjust furosemide if creatinine rising). Treat arrhythmias (digoxin, beta-blocker if AF). Admit if severe (pulmonary oedema, hypotension). IV inotropes (dobutamine) if cardiogenic shock.
ArrhythmiasOccasional (5-10% of hospitalised patients); more common in elderly, pre-existing heart diseaseMyocarditis, myocardial ischaemia, electrolyte disturbances (hypokalaemia from vomiting/dehydration), hypoxia, increased sympathetic tone (fever, catecholamines).Palpitations, chest pain, dizziness, syncope. ECG: Atrial fibrillation (most common), atrial flutter, ventricular tachycardia (if severe myocarditis), heart block (if myocarditis affecting conduction system).Atrial Fibrillation: Rate control (beta-blocker bisoprolol 2.5-10mg OD, or digoxin 125-250mcg OD if heart failure). Anticoagulation (CHA₂DS₂-VASc score ≥1 men, ≥2 women: DOAC apixaban/rivaroxaban or warfarin). Ventricular Tachycardia: If haemodynamically unstable: DC cardioversion. If stable: Amiodarone 300mg IV bolus then infusion. Heart Block: Temporary pacing wire if symptomatic (Mobitz II, complete heart block). Correct electrolytes (maintain K⁺ 4-5mmol/L, Mg²⁺ > 1mmol/L). Treat underlying cause (myocarditis, ischaemia). Cardiology referral.

Neurological Complications

ComplicationIncidenceFeaturesMechanismManagement
Encephalitis (Influenza-Associated Encephalopathy)Rare (0.5-1 per 100,000 influenza cases); more common in children (Japan: 100-300 cases/year)Altered mental status (confusion, agitation, delirium, reduced GCS), seizures (focal or generalised), focal neurological signs (hemiparesis, cranial nerve palsies), coma. Fever usually present. Rapid progression (hours-days).(1) Direct CNS invasion (rare; influenza virus detected in CSF by PCR in 10-20% cases). (2) Immune-mediated (ADEM-like; antibodies/T cells cross-react with brain tissue). (3) Cytokine storm (IL-6, TNF-α cross blood-brain barrier → encephalopathy).CT brain (exclude mass, haemorrhage) then LP (lumbar puncture): CSF: Lymphocytic pleocytosis (50-100 WCC, predominantly lymphocytes), ↑ protein (0.5-1.5 g/L), normal glucose. CSF influenza PCR (positive in 10-20%; negative does not exclude). MRI brain: T2/FLAIR hyperintensities (temporal lobes, thalamus, basal ganglia, brainstem). EEG: Diffuse slowing, epileptiform activity. Management: ICU if GCS less than 8. Oseltamivir 75mg BD (even if > 48h post-onset). Anticonvulsants if seizures (levetiracetam 500mg-1g BD loading). Supportive care: Airway protection (intubate if GCS less than 8), ICP management if raised (elevate head 30°, mannitol 0.5g/kg IV if signs of herniation). Aciclovir 10mg/kg TDS IV (empirical, until HSV excluded by CSF PCR). High-dose methylprednisolone 1g IV OD × 3 days (if ADEM suspected—post-infectious, multifocal demyelination). Prognosis: Variable. Mortality 10-30%. Survivors: 20-50% have long-term neurological sequelae (cognitive impairment, behavioural changes, epilepsy, motor deficits).
Encephalopathy (Toxic-Metabolic)Common in elderly (10-30%)Confusion, disorientation, delirium (acute, fluctuating), agitation or lethargy, no focal neurology, no seizures. Usually reversible with treatment of underlying cause.Not direct CNS invasion, but systemic effects: (1) Hypoxia (pneumonia), (2) Hyponatraemia (SIADH common in pneumonia), (3) Uraemia (dehydration, AKI), (4) Hypoglycaemia (sepsis, hepatic dysfunction), (5) Medications (anticholinergics, opioids), (6) Sepsis (systemic inflammation).Treat underlying cause: Oxygen if hypoxic (target SpO₂ 94-98%), IV fluids if dehydrated, correct electrolytes (Na⁺, glucose), treat infection (oseltamivir, antibiotics if bacterial). Avoid sedatives (worsen delirium). Orientation (clocks, calendars, familiar objects), reassurance, avoid restraints. Haloperidol 0.5-1mg PO/IM PRN if severe agitation (risk to self/others), use sparingly. Prognosis: Usually resolves with treatment. Elderly may have prolonged recovery (weeks).
Guillain-Barré Syndrome (GBS)Rare post-infectious complication (1-2 per million influenza cases); also reported post-vaccination (1 per million doses)Ascending flaccid paralysis developing 1-4 weeks post-influenza (or 2-6 weeks post-vaccination). Symmetrical weakness (legs → arms → face → respiratory muscles). Areflexia (absent reflexes). Sensory symptoms (paraesthesia, glove-and-stocking distribution, pain). Respiratory failure in 20-30% (requires intubation). Autonomic dysfunction (labile BP, arrhythmias, urinary retention).Molecular mimicry: Antibodies against influenza antigens cross-react with gangliosides on peripheral nerve myelin (anti-GM1, anti-GD1a antibodies). Immune-mediated demyelination of peripheral nerves. Acute Inflammatory Demyelinating Polyneuropathy (AIDP) most common subtype.Investigations: CSF: Albuminocytological dissociation (↑ protein > 0.55g/L, normal WCC less than 5 cells/µL). Nerve conduction studies (NCS): Demyelination (↓ conduction velocity, prolonged F-waves, conduction block). Anti-ganglioside antibodies (positive in 60%). Respiratory function: FVC (forced vital capacity) 4-hourly (intubate if FVC less than 15mL/kg or declining). Management: IVIG 0.4g/kg/day IV × 5 days OR Plasma exchange (5 exchanges over 10-14 days)—equally effective. ICU if respiratory failure (intubation, mechanical ventilation). VTE prophylaxis (LMWH; high immobilisation risk). Monitor autonomic function (telemetry, BP). Neuropathic pain management (gabapentin, amitriptyline). Physiotherapy (prevent contractures). Prognosis: 80% make good recovery (6-12 months), 10-15% have residual disability, 5-10% mortality (respiratory failure, autonomic dysfunction, PE).
Transverse MyelitisVery rare (less than 0.01%)Acute spinal cord dysfunction. Bilateral weakness (legs > arms), sensory level (loss of sensation below a specific dermatome), sphincter dysfunction (urinary retention, faecal incontinence), back pain (at level of lesion). Progression over hours-days.Post-infectious immune-mediated. Autoantibodies/T cells target spinal cord (myelin/neurons). Demyelination. Often part of ADEM (acute disseminated encephalomyelitis) spectrum.MRI spine: T2 hyperintensity (≥3 vertebral segments, central cord). LP: Lymphocytic pleocytosis, ↑ protein, oligoclonal bands (may be absent). Management: High-dose methylprednisolone 1g IV OD × 3-5 days (first-line). Plasma exchange if steroid-refractory. Bladder catheterisation (urinary retention). Bowel regimen. Neuropathic pain management. Physiotherapy. Prognosis: Variable. 30% full recovery, 40% moderate disability, 30% severe disability (paraplegia).
Febrile SeizuresChildren (5-10% of children with influenza aged 6 months-5 years); rare in adultsGeneralised tonic-clonic seizure during high fever (> 38.5°C), self-limiting (less than 5 minutes), post-ictal drowsiness. No focal neurology.High fever → ↓ seizure threshold (immature brain in children; adults usually have underlying epilepsy or structural lesion). Not true encephalitis (no direct CNS invasion).Immediate: Recovery position, protect airway, check glucose (fingerprick), oxygen. Benzodiazepine if seizure > 5 minutes (buccal midazolam 10mg or rectal diazepam 10-20mg). Investigations: Usually none needed if typical simple febrile seizure (age 6m-5y, duration less than 5min, generalised, single seizure, no focal features, rapid recovery). Atypical features (focal seizure, prolonged > 15min, multiple seizures in 24h, age less than 6m or > 5y, slow recovery) → CT/MRI brain, LP (exclude meningitis/encephalitis). Management: Antipyretics (paracetamol, ibuprofen). Reassure parents (febrile seizures common, 95% benign, do not cause brain damage). Safety-net (call 999 if seizure > 5min). Prognosis: 30% recurrence risk (subsequent febrile illness). 1-2% develop epilepsy (vs 0.5% general population—small increase).

Other Complications

ComplicationIncidenceFeaturesManagementNotes
RhabdomyolysisRare (0.01-0.1%); more common with severe myalgiaSevere muscle pain (myalgia worse than typical influenza), muscle weakness, dark urine ("coca-cola" urine—myoglobinuria), AKI (myoglobin nephrotoxic). Elevated CK (creatine kinase) > 1000 U/L (normal less than 200; severe cases > 10,000). Elevated K⁺ (hyperkalaemia from muscle breakdown, dangerous if > 6.5mmol/L), ↑ urate, ↑ phosphate. Myoglobin in urine (dipstick positive for blood, but no RBCs on microscopy).Aggressive IV fluids: 0.9% saline 10-15mL/kg/h (aim urine output > 3mL/kg/h; dilute myoglobin, prevent tubular obstruction). Monitor U&Es 6-12 hourly (watch for hyperkalaemia, hypocalcaemia, hyperphosphataemia, AKI). Treat hyperkalaemia if K⁺ > 6.5mmol/L (calcium gluconate 10mL 10% IV, insulin-dextrose, salbutamol nebulised). Dialysis if refractory hyperkalaemia or severe AKI (creatinine > 500µmol/L, oliguria). Avoid NSAIDs (nephrotoxic). Monitor CK (should downtrend with fluids). Prognosis: 5-10% mortality (AKI, multi-organ failure). Most recover with aggressive fluids.Peak CK may be > 50,000 U/L in severe cases. AKI risk if CK > 5000. Compartment syndrome possible (rare; measure compartment pressures if limb swelling/tense).
Reye's SyndromeVery rare (now almost never seen in developed countries since aspirin avoidance in children)Acute encephalopathy + hepatic failure in children/adolescents given aspirin during viral illness (influenza, varicella). Vomiting, lethargy, confusion, seizures, coma. Liver: ↑ transaminases (AST/ALT > 1000 U/L), ↑ ammonia (> 100µmol/L), coagulopathy (↑ PT/INR), hypoglycaemia. Brain: Cerebral oedema (↑ ICP, herniation). Microvesicular steatosis (fatty liver) on biopsy.ICU: Airway protection (intubate if GCS less than 8), ICP management (elevate head 30°, mannitol 0.5g/kg IV if herniation signs, consider ICP monitor), correct hypoglycaemia (10% dextrose infusion), correct coagulopathy (vitamin K 10mg IV, FFP if bleeding), N-acetylcysteine (may help hepatic dysfunction). Treat cerebral oedema. Prognosis: Mortality 20-40% (cerebral herniation). Survivors may have neurological sequelae.PREVENTION IS KEY: NEVER give aspirin to children/adolescents less than 18 years with viral illness (influenza, varicella). Use paracetamol or ibuprofen instead. Educate parents. Reye's syndrome incidence has fallen > 95% since 1980s due to aspirin avoidance campaigns.
Multi-Organ Failure (MOF)Rare (1-2% of hospitalised patients); occurs in severe influenza (viral pneumonia, ARDS, septic shock)Shock (systolic BP less than 90mmHg despite fluids), ARDS (P/F less than 200), AKI (creatinine > 200µmol/L, oliguria less than 0.5mL/kg/h), coagulopathy (DIC: ↓ platelets, ↑ PT/APTT, ↓ fibrinogen, ↑ D-dimer), hepatic dysfunction (↑ transaminases, ↑ bilirubin), encephalopathy (↓ GCS). SOFA (Sequential Organ Failure Assessment) score ≥2 points increase = sepsis. Lactate > 4mmol/L (tissue hypoperfusion).ICU: Mechanical ventilation (ARDS protocol), vasopressors (noradrenaline 0.05-0.5µg/kg/min, target MAP > 65mmHg), IV fluids (30mL/kg crystalloid within 3h if septic shock), antibiotics (co-amoxiclav + clarithromycin ± vancomycin, broad-spectrum), oseltamivir 75mg BD, renal replacement therapy (CRRT if AKI), blood products (platelets if less than 50, FFP if PT > 1.5× normal and bleeding), organ support. Early goal-directed therapy (ScvO₂ > 70%, lactate clearance). Source control (drain abscess/empyema if present). Prognosis: Mortality 40-70% (age, comorbidities, number of organs failing).Cytokine storm drives MOF (IL-6, TNF-α, IL-1β). Secondary haemophagocytic lymphohistiocytosis (HLH) can occur (ferritin > 10,000, ↓ fibrinogen, hepatosplenomegaly, haemophagocytosis on bone marrow). Consider etoposide/dexamethasone if HLH (specialist haematology).
Secondary Bacterial Infections (Non-Pulmonary)Uncommon (5-10%)Bacteraemia/sepsis (S. aureus, S. pneumoniae), meningitis (S. pneumoniae, rare), endocarditis (if pre-existing valvular disease, very rare).Blood cultures, LP if meningitis suspected, echocardiography if endocarditis suspected. IV antibiotics (vancomycin + ceftriaxone if meningitis; flucloxacillin + gentamicin if endocarditis).Immunocompromised patients higher risk.
Exacerbation of Chronic DiseaseVery common in patients with pre-existing conditions (30-60%)Asthma (↑ wheeze, ↓ PEFR), COPD (↑ dyspnoea, ↑ sputum), heart failure (pulmonary oedema, ↑ JVP), diabetes (DKA, HHS, ↑ glucose), CKD (AKI, fluid overload), cirrhosis (hepatic decompensation, ascites, encephalopathy).Optimise management of underlying condition (see specific sections above). May require hospitalisation. Increased morbidity and mortality.Influenza vaccination reduces exacerbations of chronic disease (asthma exacerbations ↓ 40%, COPD exacerbations ↓ 30%, heart failure admissions ↓ 50%).

9. Prognosis and Outcomes

Uncomplicated Influenza (Healthy Adults)

OutcomeTimelineNotes
Fever resolution3-5 daysHigh fever (38-40°C) typically resolves by day 3-5. Persistence > 7 days suggests bacterial superinfection.
Acute symptoms (myalgia, headache, malaise)5-7 daysSystemic symptoms improve markedly by end of week 1. Patients feel "back to normal" (aside from cough, fatigue).
Cough1-3 weeks (may persist up to 4 weeks)Initially dry, may become productive in week 2. Prolonged cough common (post-viral airway hyperreactivity). Chronic cough (> 8 weeks) unusual—investigate alternative causes.
Fatigue2-4 weeks (occasionally longer—"post-viral fatigue")Profound fatigue common. 10-20% report fatigue > 4 weeks. Reassure patients this is normal post-viral recovery (not chronic fatigue syndrome unless persists > 6 months).
Return to work/normal activities5-10 days (when fever-free for 24-48h and able to function)Earlier return associated with prolonged recovery. Recommend full week off work/school.
Full recovery (100% baseline function)2-4 weeksComplete recovery expected by 1 month. Patients should be counselled to expect 2-4 week recovery (not "just a few days").

Mortality Risk Stratification

Risk GroupCase Fatality Rate (CFR)Key DriversAbsolute Risk per Season
Healthy adults (18-64 years)less than 0.01% (less than 1 per 10,000 infections)Very low risk. Deaths rare. Usually due to unexpected fulminant viral pneumonia or myocarditis (unpredictable).~1 in 100,000 healthy adults die from seasonal influenza annually.
Age ≥65 years0.5-1% (50-100 per 10,000 infections)Immunosenescence, comorbidities (cardiac, pulmonary, diabetes), frailty, pneumonia, cardiovascular events. 90% of seasonal influenza deaths in this age group.~1 in 200 elderly adults die from influenza annually (accounts for 10,000-30,000 deaths/year in UK).
Chronic medical conditions (any age)0.5-2%COPD (↑ respiratory failure), CHF (↑ decompensation), diabetes (↑ sepsis, DKA), CKD (↑ sepsis), immunosuppression (↑ prolonged shedding, severe disease). Risk increased 3-10× depending on condition.Variable. COPD patients: ~1 in 200. CHF patients: ~1 in 300.
Pregnancy (especially 3rd trimester)0.1-0.5%Altered cell-mediated immunity, ↓ FRC (↑ hypoxia risk), ↑ oxygen consumption. Mortality 4-5× non-pregnant women of same age. 2009 H1N1: Pregnant women were 5% of population but 30% of deaths in reproductive-age women.~1 in 2,000 pregnant women with influenza die (higher in 3rd trimester).
Hospitalised patients (all causes)5-10%Selected for severity/risk factors. Pneumonia (viral or bacterial), ARDS, sepsis, multi-organ failure.~1 in 20 hospitalised influenza patients die.
ICU patients20-40%ARDS (P/F less than 100), septic shock, multi-organ failure, refractory hypoxia. Despite maximal support (mechanical ventilation, ECMO).~1 in 3 ICU influenza patients die.
Pandemic strains (novel H/N)Variable (0.5-5% depending on virulence and population immunity)1918 H1N1 "Spanish Flu": CFR ~2.5%, 50-100 million deaths, unusual W-shaped mortality (young adults). 1957 H2N2 "Asian Flu": CFR ~0.5%, 1-2 million deaths. 1968 H3N2 "Hong Kong Flu": CFR ~0.3%, 1 million deaths. 2009 H1N1: CFR ~0.02%, 150,000-575,000 deaths, younger median age of death, obesity major risk factor. H5N1 avian influenza: CFR 50-60% (of detected cases, severe selection bias), limited human-to-human transmission (pandemic potential if acquires transmissibility). H7N9 avian influenza: CFR 35-40%, sporadic human cases (China), no sustained transmission.Pandemic preparedness critical. Vaccine development 6-8 months (reverse genetics faster). Stockpile antivirals (oseltamivir).

Prognostic Factors (Adverse Outcomes—Hospitalisation, ICU, Death)

Demographic:

  • Age ≥65 years (OR 5-10 for death vs 18-64 age group)
  • Age less than 2 years (children—U-shaped mortality curve)
  • Pregnancy (especially 3rd trimester; OR 4-5 for hospitalisation vs non-pregnant)

Comorbidities (Odds Ratios for Death):

  • Chronic respiratory disease: OR 3-5 (COPD > asthma > ILD)
  • Chronic cardiac disease: OR 3-5 (CHF > IHD)
  • Diabetes mellitus: OR 3-6 (type 1 > type 2)
  • Chronic kidney disease: OR 2-4 (dialysis > CKD 3-5)
  • Chronic liver disease (cirrhosis): OR 5-10
  • Immunosuppression: OR 5-20 (haematological malignancy >> solid organ transplant > HIV > chemotherapy)
  • Severe obesity (BMI ≥40): OR 2-3
  • Neurological disease (impaired cough/swallow): OR 2-4

Clinical Presentation (At Hospital Admission):

  • Hypoxia: SpO₂ less than 92% on air (OR 5-10 for death; SpO₂ less than 88% OR 10-20)
  • Altered mental status / Confusion (OR 5-10)
  • Hypotension: Systolic BP less than 90 mmHg (OR 5-10; septic shock)
  • Tachycardia: Pulse > 125/min not explained by fever (OR 2-4)
  • Tachypnoea: Respiratory rate > 30/min (OR 5-10)
  • Bacterial superinfection (OR 3-5; especially S. aureus necrotising pneumonia OR 10-20)
  • Bilateral infiltrates on CXR (viral pneumonia; OR 5-10 vs unilateral)

Laboratory Findings (At Admission):

  • Lymphopenia: Absolute lymphocyte count less than 0.6 × 10⁹/L (OR 2-3)
  • Elevated CRP: > 100 mg/L (suggests bacterial superinfection; OR 2-4)
  • Acute kidney injury: Creatinine > 200µmol/L or ↑ > 50% from baseline (OR 3-5)
  • Elevated LDH: > 400 U/L (marker of tissue damage, ARDS; OR 2-4)
  • Thrombocytopenia: Platelets less than 100 × 10⁹/L (DIC, sepsis; OR 3-5)
  • Elevated troponin: > 100 ng/L (myocarditis, MI, type 2 MI; OR 2-4)
  • Lactate > 2 mmol/L (tissue hypoperfusion, sepsis; OR 3-5; lactate > 4 OR 10-20)

Time to Antiviral Treatment:

  • Early oseltamivir (less than 48h from symptom onset): Baseline mortality
  • Late oseltamivir (> 48h): Still beneficial in hospitalised patients (OR 0.79 for death vs no treatment), but less effective than early treatment

Long-Term Sequelae

Most patients recover fully. However, a subset experience persistent symptoms or late complications:

Post-Viral Fatigue Syndrome:

  • Incidence: 10-20% report fatigue lasting > 4 weeks; 5% report fatigue > 12 weeks
  • Features: Persistent tiredness, reduced exercise tolerance, post-exertional malaise, difficulty concentrating ("brain fog"), sleep disturbances
  • Pathophysiology: Unclear. Hypotheses: mitochondrial dysfunction, persistent immune activation, hypothalamic-pituitary-adrenal axis dysregulation
  • Management: Reassurance (usually resolves 2-6 months), graded exercise therapy (gradual increase in activity), cognitive behavioural therapy if prolonged, exclude alternative causes (anaemia, thyroid dysfunction, depression). Distinguish from Chronic Fatigue Syndrome (ME/CFS) which requires symptoms > 6 months + specific diagnostic criteria.

Impaired Pulmonary Function:

  • After viral pneumonia/ARDS: May have persistent restrictive lung disease (↓ FVC, ↓ DLCO), pulmonary fibrosis (ground-glass on CT → honeycombing if severe), reduced exercise tolerance
  • Duration: Weeks-months for mild, permanent in severe cases (post-ARDS fibrosis in 20-30%)
  • Management: Pulmonary rehabilitation, oxygen if hypoxic (home LTOT if PaO₂ less than 7.3kPa), treat any ongoing inflammation (controversial; some advocate corticosteroids if evidence of organising pneumonia), serial spirometry and CT chest to monitor

Cardiovascular Events—Increased Risk Persists Weeks-Months:

  • Myocardial infarction: Risk elevated for 1-2 months post-influenza (6-10× in week 1, 2-3× in weeks 2-4, returns to baseline by 8-12 weeks). [17]
  • Stroke: Increased risk for 1 month (2-3× baseline)
  • Mechanism: Persistent inflammation (↑ CRP, ↑ IL-6 for weeks), plaque instability, hypercoagulable state
  • Implication: Influenza vaccination reduces cardiovascular events (15-45% reduction in MI risk)—important preventive cardiology intervention [17]

Exacerbation of Chronic Disease—Return to Baseline May Take Weeks-Months:

  • COPD: Lung function may not return to pre-exacerbation baseline (10-20% have permanent ↓ FEV1 after severe exacerbation)
  • Asthma: Airway hyperreactivity may persist weeks (↑ ICS dose post-influenza)
  • Heart failure: Decompensation may take weeks to optimise (adjust diuretics, uptitrate ACE-inhibitor/beta-blocker gradually)
  • Diabetes: Glycaemic control disrupted (may require ↑ insulin doses for weeks post-illness)

Functional Decline in Elderly:

  • Incidence: 20-30% of elderly hospitalised with influenza have persistent functional decline (↓ ADLs, ↓ mobility)
  • Risk factors: Frailty (Clinical Frailty Scale ≥5), delirium during admission, prolonged hospitalisation (> 7 days), complications (pneumonia, falls)
  • Management: Comprehensive geriatric assessment, physiotherapy, occupational therapy, home care package, consider care home if cannot cope independently

10. Prevention

Vaccination

Annual influenza vaccination is the single most effective preventive intervention, reducing influenza infection, severity, complications, and mortality even in seasons with suboptimal antigenic match. [11,12,21]

Vaccine Types

VaccineFormulationAge GroupEfficacyNotes
Quadrivalent Inactivated (QIV)Intramuscular injection (deltoid)≥6 months40-60% (variable by season, age, match)Standard vaccine. Contains 2 Influenza A strains (H1N1, H3N2) + 2 Influenza B lineages (Victoria, Yamagata). Split-virus or subunit. Grown in embryonated hen's eggs. Annual reformulation based on WHO recommendations (circulating strains).
Live Attenuated Influenza Vaccine (LAIV)Intranasal spray (0.2mL, 0.1mL per nostril)2-17 years (UK); 2-49 years (USA)40-60% (similar to QIV in healthy children; superior to QIV in children 2-7 years in some studies)Nasal spray (Fluenz Tetra in UK, FluMist in USA). Cold-adapted, temperature-sensitive strains (replicate at 25°C in nasal mucosa, not 37°C in lower airway). Contraindicated: Pregnancy, immunosuppression (any cause—transplant, biologics, high-dose steroids, HIV), severe asthma/active wheeze, aspirin therapy in children (less than 18 years—theoretical Reye's risk), egg allergy with anaphylaxis. Advantages: Needle-free (better acceptability in children), induces mucosal IgA (broader protection). Viral shedding occurs (low-level, 2-3 days; isolate from severely immunocompromised for 7 days).
Adjuvanted QIVIM injection + adjuvant (MF59, oil-in-water emulsion)≥65 years (UK)Superior to standard QIV in elderly: Efficacy 63% vs 51% (relative efficacy 1.24). Reduces hospitalisation 25% more than standard QIV. [21]Enhanced immune response in elderly (immunosenescence → reduced vaccine response; adjuvant overcomes this). MF59 adjuvant stimulates innate immunity (↑ cytokines, ↑ antigen-presenting cells). Recommended for ≥65 age group in UK (replaced standard QIV for elderly 2018). Slightly more local reactions (soreness, redness), but well tolerated. Examples: Fluad Quadrivalent.
High-Dose QIVIM injection (4× antigen dose: 60µg HA per strain vs standard 15µg)≥65 years (USA, not routinely available UK)Superior to standard QIV in elderly: Efficacy 24% higher relative to standard dose. Reduces hospitalisation for influenza by 27%.Alternative for elderly (USA preference). Higher antigen dose → Better antibody response in immunosenescent elderly. More reactogenic (↑ local reactions—soreness, swelling). Examples: Fluzone High-Dose Quadrivalent.
Cell-Culture QIVIM injection; virus grown in mammalian cell culture (MDCK cells) instead of eggs≥18 yearsEquivalent to standard egg-based QIV (non-inferiority trials)No egg proteins (suitable for severe egg allergy with history of anaphylaxis). Avoids egg-adaptation mutations (H3N2 virus mutates during egg-based production → reduced vaccine effectiveness; cell-culture avoids this). May have superior effectiveness in H3N2-predominant seasons (limited data, theoretical). Examples: Flucelvax Quadrivalent. More expensive; not routinely available in UK.
Recombinant HA QIVIM injection; recombinant haemagglutinin protein produced in insect cells (baculovirus expression system)≥18 yearsEquivalent to standard QIVNo egg proteins, no influenza virus (only recombinant HA protein). Suitable for severe egg allergy. Faster production (no need to grow virus; pandemic advantage). Higher HA dose (45µg vs 15µg in standard). Examples: Flublok Quadrivalent. Not available in UK.

Vaccine Composition (Annual Update)

WHO Global Influenza Surveillance and Response System (GISRS) monitors circulating strains globally via 144 National Influenza Centres in 114 countries. Vaccine composition updated twice annually:

  • February (Northern Hemisphere season, October-March)
  • September (Southern Hemisphere season, May-September)

Selection Process:

  1. Global surveillance identifies circulating strains (October-January for Northern Hemisphere)
  2. WHO convenes expert committee (February)
  3. Selects 4 strains (2 Influenza A, 2 Influenza B) based on: (a) Predominance, (b) Antigenic drift from previous vaccine, (c) Epidemiological data
  4. Manufacturers produce vaccines (6-8 months) using selected strains

2025-2026 Northern Hemisphere Season Composition (Example):

  • A/Victoria/4897/2022 (H1N1)pdm09-like virus (descendant of 2009 pandemic strain)
  • A/Thailand/8/2022 (H3N2)-like virus (recent H3N2 clade)
  • B/Austria/1359417/2021 (B/Victoria lineage)-like virus (dominant B lineage)
  • B/Phuket/3073/2013 (B/Yamagata lineage)-like virus (declining circulation; may be removed future seasons)

Note: B/Yamagata has not been detected globally since March 2020 (COVID-19 NPIs may have driven extinction). Trivalent vaccines (2 A strains + 1 B strain, Victoria lineage only) under consideration.

Vaccine Effectiveness

Efficacy vs Effectiveness:

  • Vaccine Efficacy (VE): Measured in randomised controlled trials (RCT) under ideal conditions
  • Vaccine Effectiveness: Real-world performance (observational studies, test-negative design)

Effectiveness varies by:

1. Antigenic Match (Major Determinant):

  • Well-matched seasons (vaccine strains antigenically similar to circulating strains): VE 50-70%
  • Mismatched seasons (circulating strains drifted from vaccine strains): VE 10-30%
  • Example: 2014-2015 season (H3N2 mismatch): VE 19% overall. 2017-2018 season (H3N2 mismatch): VE 25%. 2019-2020 season (well-matched): VE 45%.

2. Virus Subtype:

  • H1N1pdm09: VE 50-70% (most seasons; well-matched, less prone to egg adaptation)
  • H3N2: VE 30-40% (lower due to rapid antigenic drift + egg-adaptation mutations during vaccine production → vaccine strain differs from circulating wild-type). Egg-grown H3N2 vaccine viruses acquire mutations (e.g., in receptor-binding site) → reduced cross-reactivity.
  • Influenza B: VE 50-60%

3. Age:

  • Children (2-17 years): VE 60-80% (robust immune response)
  • Adults (18-64 years): VE 40-60%
  • Elderly (≥65 years): VE 30-40% (immunosenescence → reduced antibody response, ↓ T cell function). Solution: Adjuvanted or high-dose vaccines (VE 50-60% in elderly, superior to standard dose).

4. Prior Immunity ("Original Antigenic Sin" / Immune Imprinting):

  • First influenza exposure in childhood shapes lifelong immune responses (imprinting)
  • Subsequent infections/vaccinations preferentially recall memory responses to childhood strains ("back-boosting") → May reduce response to drifted strains
  • Complex interactions: Prior vaccination can enhance or reduce current vaccine effectiveness depending on strains involved

Effectiveness Against Outcomes (Even When VE Against Infection is Moderate):

OutcomeVaccine EffectivenessPopulationNotes
Symptomatic influenza (lab-confirmed)40-60%All ages (well-matched season)Primary endpoint in most studies. Test-negative design.
Hospitalisation (influenza-associated)50-70%High-risk groups (elderly, chronic disease, pregnancy)Vaccine reduces severity even when infection occurs. [11,12]
ICU admission70-80%All hospitalised influenza patientsSevere disease markedly reduced.
Death (influenza-associated)70-85%Elderly (≥65 years)Mortality reduction persists even in mismatched seasons (40-60% VE against death). [5]
Cardiovascular events (MI, stroke)15-45%Adults with/without known cardiovascular diseaseVaccination reduces MI risk by 36% (meta-analysis of 6 RCTs). Stroke risk reduced 23%. Effect likely mediated by preventing influenza-triggered inflammation and thrombosis. [17]
Exacerbation of chronic disease30-50%Asthma exacerbations ↓ 40%, COPD exacerbations ↓ 30%, heart failure admissions ↓ 50%Prevents influenza-triggered decompensation.

Key Principle: Vaccine reduces severity, complications, and mortality even when it does not completely prevent infection. Partial immunity (from vaccine or prior infection) attenuates disease.

Eligible Groups (UK NHS Funded Vaccination)

All individuals with ANY of the following (NHS-funded; free at point of care):

Age:

  • Age ≥65 years (all individuals; no exclusions)

Pregnancy:

  • Pregnancy (any trimester; includes 1st trimester, 2nd, 3rd)
  • Up to 2 weeks postpartum (if not vaccinated during pregnancy)

Chronic Respiratory Disease:

  • Asthma requiring regular inhaled corticosteroids (any dose) or previous hospital admission for asthma
  • COPD (any stage; GOLD 1-4)
  • Bronchiectasis
  • Interstitial lung disease (ILD; pulmonary fibrosis)
  • Cystic fibrosis

Chronic Cardiac Disease:

  • Congestive heart failure (CHF; any stage)
  • Ischaemic heart disease (IHD; previous MI, angina, coronary stents/CABG)
  • Congenital heart disease (structural defects)
  • Valvular disease (moderate-severe; prosthetic valves)

Chronic Kidney Disease:

  • CKD stage 3-5 (eGFR less than 60 mL/min)
  • Dialysis (haemodialysis, peritoneal dialysis)
  • Nephrotic syndrome
  • Kidney transplant

Chronic Liver Disease:

  • Cirrhosis (any cause; compensated or decompensated)
  • Chronic hepatitis (hepatitis B, hepatitis C)
  • Alcohol-related liver disease

Chronic Neurological Disease:

  • Stroke or TIA (any history)
  • Dementia (Alzheimer's, vascular, Lewy body, frontotemporal)
  • Parkinson's disease
  • Multiple sclerosis (MS)
  • Motor neurone disease (MND; ALS)
  • Cerebral palsy
  • Epilepsy (on medication)
  • Hereditary/degenerative CNS disease
  • Learning disabilities

Diabetes Mellitus:

  • Type 1 diabetes
  • Type 2 diabetes (any treatment; diet-controlled, oral agents, insulin)

Immunosuppression:

  • HIV (any CD4 count; especially CD4 less than 200)
  • Chemotherapy (current or within 6 months)
  • Solid organ transplant (kidney, liver, heart, lung, pancreas; lifelong)
  • Bone marrow transplant (lifelong)
  • Asplenia (splenectomy, sickle cell disease, coeliac disease with hyposplenism)
  • Biologics (TNF-α inhibitors—adalimumab, infliximab, etanercept; rituximab; other immunomodulators)
  • Long-term corticosteroids (≥20mg prednisolone daily for > 2 weeks; or lower doses if immunosuppressive)
  • Primary immunodeficiency (congenital)

Severe Obesity:

  • BMI ≥40 kg/m² (morbid obesity)

Care Home Residents:

  • Residents of care homes or long-stay facilities (elderly or disabled)

Carers:

  • Main carer for elderly or disabled individual (receipt of Carer's Allowance, or main unpaid carer)

Healthcare Workers:

  • Frontline healthcare workers (direct patient contact)
  • Social care workers (care homes, domiciliary care)

Children:

  • All children aged 2-16 years (school-age programme; LAIV intranasal spray)
  • Children less than 2 years with clinical risk factors (as per chronic disease list above; inactivated vaccine only—LAIV not licensed less than 2 years)

Timing of Vaccination

AspectRecommendationRationale
Optimal TimingSeptember-October (before season starts)Influenza season in UK typically peaks December-February. Vaccination takes 10-14 days to develop protective antibody levels. Vaccinating in September-early October ensures protection before circulation increases.
Protection Onset10-14 days post-vaccinationAntibody titres (haemagglutination inhibition, HAI titre ≥40 considered protective) develop 10-14 days post-vaccination. Peak titres 3-4 weeks post-vaccination.
Duration of Protection6-8 months (wanes over season)Antibody titres decline by approximately 50% over 6 months (exponential decay). By end of season (March-April), antibody levels may be below protective threshold in some individuals (especially elderly). This is why annual vaccination is required (not just antigenic drift).
Late VaccinationStill beneficial even during season (until March/April)If not vaccinated in September-October, vaccinate as soon as possible during season. Even mid-season vaccination (December-January) provides protection for remainder of season. Better late than never.
Early Vaccination (July-August)Avoid (too early; antibodies may wane before season ends)Vaccination in July-August not recommended (antibodies may wane by February-March when influenza still circulating). Exception: Pregnancy (if 3rd trimester in July-August, vaccinate to ensure protection before delivery).
Repeat Vaccination Within Same SeasonNot recommended (no additional benefit)One dose per season sufficient. Repeat vaccination does not boost antibody levels (immune interference). Exception: Children less than 9 years receiving first-ever influenza vaccine (2-dose priming schedule, 4 weeks apart; second season onwards, 1 dose).

Contraindications and Precautions

Absolute Contraindications (Inactivated Vaccine):

  • Severe allergic reaction (anaphylaxis) to previous dose of influenza vaccine (rare; less than 1 per million doses)
  • Severe allergic reaction to vaccine component (if known specific allergy to gelatin, antibiotics in vaccine—rare)

Absolute Contraindications (Live Attenuated Nasal Spray—LAIV):

  • Immunosuppression (any cause): HIV, chemotherapy, transplant, biologics, high-dose corticosteroids (≥20mg prednisolone > 2 weeks or equivalent), primary immunodeficiency
  • Pregnancy (theoretical risk of live virus to fetus; no documented cases of harm, but avoid as precaution)
  • Severe asthma or active wheeze (risk of bronchospasm; defined as requiring oral corticosteroids in previous 72 hours, or hospitalisation for asthma in previous 12 months)
  • Aspirin/salicylate therapy in children less than 18 years (theoretical risk of Reye's syndrome with live viral infection + aspirin; no cases reported, but avoid as precaution)
  • Severe egg allergy with anaphylaxis (if inactivated egg-free vaccine not available; though LAIV has very low ovalbumin content and most egg-allergic children tolerate it)
  • Close contact with severely immunosuppressed (requiring protective isolation; vaccinated individual sheds low-level LAIV virus for 2-3 days → theoretical transmission risk → isolate from severely immunosuppressed for 7 days post-LAIV)

Precautions (Defer Vaccination Until Resolved):

  • Moderate-severe acute illness with fever > 38°C (defer until recovered; rationale: distinguish vaccine side effects from illness progression; immune response may be impaired if acutely unwell)
    • Mild illness (URTI, low-grade fever less than 38°C) is NOT a contraindication—vaccinate as planned (delaying for minor illnesses leads to missed opportunities)
  • Guillain-Barré Syndrome (GBS) within 6 weeks of previous influenza vaccination (very rare; causal link uncertain; theoretical recurrence risk)
    • "Risk-benefit analysis: Influenza itself causes GBS (10× more frequently than vaccine). Most experts still recommend vaccination in individuals with prior GBS (unless it occurred within 6 weeks of previous flu vaccine). Discuss risks/benefits; patient choice."

Egg Allergy:

  • Most influenza vaccines contain trace egg protein (ovalbumin; grown in embryonated hen's eggs during production)
  • Mild egg allergy (urticaria, mild rash, no anaphylaxis): Safe to receive standard egg-based vaccine (QIV, adjuvanted, high-dose). Can vaccinate in primary care. Observe 15 minutes post-vaccination.
  • Severe anaphylaxis to egg (previous anaphylaxis—respiratory distress, hypotension, angioedema requiring adrenaline):
    • "Option 1: Use egg-free vaccine (cell-culture QIV, recombinant HA QIV—if available)"
    • "Option 2: Vaccinate in hospital setting (allergy clinic, resuscitation facilities available) with standard vaccine. Observe 60 minutes. Pre-medication not required. (Evidence: Ovalbumin content in vaccines is very low—less than 0.1µg per dose; most egg-allergic individuals tolerate vaccination. Major guidelines support vaccination even in severe egg allergy.)"

Pregnancy:

  • Inactivated vaccine (QIV, adjuvanted) is SAFE in any trimester (extensive safety data; no increased risk of miscarriage, congenital anomalies, preterm birth, low birth weight)
  • Strongly recommended (benefits far outweigh theoretical risks):
    • Protects mother (pregnancy is high-risk group; 4-7× hospitalisation risk)
    • Protects infant via transplacental antibodies (passive immunity for first 6 months; infants less than 6 months cannot be vaccinated directly; maternal vaccination reduces infant influenza by 63% and hospitalisation by 81%)
  • Optimal timing: 2nd or 3rd trimester preferred (maximal antibody transfer in late pregnancy), but can vaccinate in any trimester (including 1st)—do not delay
  • LAIV contraindicated in pregnancy (live virus; use inactivated vaccine instead)

Vaccine Safety

Common Side Effects (10-40%; Mild, Self-Limiting 1-2 Days):

Side EffectInactivated Vaccine (IM)LAIV (Intranasal)Management
Injection site reactions30-40%: Pain, redness, swelling, induration (1-2cm diameter) at injection site.N/A (no injection)Local reactions normal (immune activation). Resolve 1-2 days. Paracetamol if painful. Warm compress.
Systemic symptoms10-20%: Low-grade fever (37.5-38°C), myalgia, malaise, headache, fatigue.10-30%: Runny nose, nasal congestion, sore throat, cough.Represents immune activation, NOT influenza (inactivated vaccine contains no live virus; LAIV is attenuated, does not cause systemic influenza). Paracetamol, rest. Resolves 1-2 days.

Rare Adverse Events (less than 1 per 100,000 doses):

Adverse EventIncidenceNotes
Guillain-Barré Syndrome (GBS)1-2 per million doses (excess risk 1-2 additional cases per million vaccinated vs background rate of ~10-20 per million per year)Historical context: 1976 swine flu vaccine (A/New Jersey/1976 H1N1) associated with GBS (8-9 per million, causal link probable). Modern vaccines: Excess risk much lower (1-2 per million). Influenza infection itself causes GBS at 10× higher rate (10-20 per million infections) → Vaccination reduces overall GBS risk. Risk-benefit strongly favours vaccination.
Anaphylaxisless than 1 per million dosesSevere allergic reaction (respiratory distress, hypotension, angioedema) within minutes-hours post-vaccination. Treat with IM adrenaline 0.5mg (500mcg), IV fluids, antihistamines, corticosteroids. All vaccination sites should have adrenaline available. Observe high-risk patients (previous severe allergy) for 30 minutes post-vaccination.
Oculorespiratory syndrome (ORS)Rare (1 per 100,000; predominantly reported with Canadian vaccines 2000-2001)Bilateral red eyes, facial oedema, respiratory symptoms (cough, wheeze, throat tightness) within 24h of vaccination. Self-limiting (resolves 48h). Not anaphylaxis (no hypotension, angioedema). Unclear mechanism (immune complex?). Not seen with modern vaccines.

Important: Vaccines Do NOT Cause Influenza

  • Inactivated vaccines contain no live virus (chemically inactivated, fragmented, or recombinant protein only) → Cannot replicate → Cannot cause infection
  • LAIV contains live attenuated virus, but strains are cold-adapted and temperature-sensitive (replicate at 25°C in nasal mucosa, NOT at 37°C in lungs) → Cause mild nasal symptoms (runny nose), not systemic influenza
  • Patients who develop influenza-like illness shortly after vaccination either:
    1. Coincidental exposure (incubating influenza at time of vaccination; takes 10-14 days for vaccine to work)
    2. Other respiratory virus (rhinovirus, RSV, coronavirus, adenovirus—vaccination does not protect against these)
    3. Vaccine side effects (mild systemic symptoms from immune activation, not true influenza)

Vaccine Safety in Special Populations:

  • Pregnancy: Safe (extensive data; no harm to mother or fetus)
  • Breastfeeding: Safe (antibodies in breast milk may provide passive protection to infant)
  • Immunocompromised: Inactivated vaccine safe (may have reduced efficacy; consider serological testing to confirm seroconversion; do not use LAIV—contraindicated)
  • Elderly: Safe (adjuvanted/high-dose vaccines well tolerated; more local reactions but acceptable)
  • Children: Safe (inactivated vaccine from 6 months; LAIV from 2 years)

Chemoprophylaxis (Antiviral Prophylaxis)

Neuraminidase inhibitors can prevent influenza infection (70-90% efficacy) if taken prophylactically. However, chemoprophylaxis is NOT a substitute for vaccination.

Indications (UK PHE / NICE Guidance)

1. Post-Exposure Prophylaxis (PEP):

  • Unvaccinated or under-vaccinated high-risk individual exposed to confirmed influenza case (close contact: household, residential setting, hospital ward)
  • Immunocompromised individual (even if vaccinated; vaccine response may be inadequate)
  • Timing: Start within 48 hours of exposure (ideally within 24h)
  • Duration: 10 days from last exposure

2. Outbreak Control:

  • Care home or hospital ward outbreak (≥2 linked cases within 7 days)
    • Offer to all residents/patients on affected ward/home (regardless of vaccination status)
    • Offer to staff working on affected ward (especially unvaccinated)
  • Duration: Until 7 days after last case (or 2 weeks, whichever is longer)

3. Seasonal Prophylaxis (Rare):

  • High-risk immunocompromised individual during influenza season if:
    • Vaccine contraindicated (severe allergy) OR
    • Vaccine unlikely to be effective (severe T cell immunodeficiency; consider serological testing—if antibody titres less than 40 HAI after vaccination, prophylaxis may be warranted)
  • Duration: Throughout influenza season (3-4 months; October-March)—rarely done due to cost, resistance concerns, adherence

NOT Recommended:

  • Healthy individuals (low risk of severe disease; vaccination preferred)
  • Alternative to vaccination (vaccination is superior for population protection; chemoprophylaxis only supplements in specific scenarios)

Regimen

DrugProphylaxis DoseDurationNotes
Oseltamivir75mg ONCE daily PO10 days (PEP), 14 days-4 months (outbreak/seasonal)Half the treatment dose (treatment is 75mg BD; prophylaxis 75mg OD). Dose adjust for renal impairment: CrCl 30-60: 30mg OD; CrCl 10-30: 30mg alternate days; CrCl less than 10: 30mg once weekly (after each dialysis session).
Zanamivir10mg (2 inhalations) ONCE daily10 days (PEP), 28 days (outbreak)Inhaled. Avoid in asthma/COPD (bronchospasm risk). Adherence may be issue (daily inhalation for weeks).

Efficacy

  • 70-90% reduction in influenza infection risk if started within 48h of exposure (meta-analysis of RCTs)
  • Does NOT eliminate risk completely (10-30% still develop influenza; breakthrough infections occur, sometimes with resistant virus)
  • Protective only during treatment (once stopped, protection ceases immediately—no lasting immunity, unlike vaccination)

Limitations

  • Not a substitute for vaccination
    • Vaccine provides season-long protection (6-8 months)
    • Vaccine reduces severity even if infection occurs
    • Vaccine protects population (herd immunity)
    • Chemoprophylaxis only protects individual during treatment period
  • Risk of antiviral resistance if used widely (especially oseltamivir; H275Y mutation in H1N1)
  • Cost (£20-30 per 10-day course; seasonal prophylaxis £200-300)
  • Adherence (daily medication for weeks/months; difficult in practice)
  • Limited duration of protection (only during treatment; no immunological memory)

Recommendation: Vaccination is primary prevention. Chemoprophylaxis is adjunctive in specific high-risk scenarios (unvaccinated exposed individual, outbreak control).

Non-Pharmaceutical Interventions (NPIs)

Individual Measures

InterventionEfficacyEvidencePractical Recommendation
Hand hygiene (soap and water, or alcohol gel)~30% reduction in transmissionSystematic reviews show hand hygiene reduces respiratory infections 20-30%. Influenza virus survives on hands 5 minutes, on hard surfaces 24-48 hours. Hand-to-face contact (eyes, nose, mouth) is important transmission route.Wash hands frequently (before eating, after toilet, after coughing/sneezing, after touching public surfaces). Soap and water (20 seconds, lather, rinse). Alcohol gel (60-90% alcohol, rub until dry) if soap unavailable.
Respiratory etiquette (cover coughs/sneezes)Moderate effect (difficult to quantify)Droplets travel less than 1-2 metres. Covering mouth/nose reduces droplet spray.Cover coughs/sneezes with tissue (dispose immediately) or elbow (not hands—contaminates hands → fomite transmission). "Catch it, Bin it, Kill it" (UK public health slogan).
Avoid touching faceModerate effectAverage person touches face 15-23 times per hour. Virus enters via mucous membranes (eyes, nose, mouth). Hand contamination → face touching → infection.Conscious effort to avoid touching eyes/nose/mouth (especially in public). Hand hygiene before face contact.
Avoid close contact with sick individualsHigh effect (if feasible)Droplet transmission requires less than 1-2 metre proximity. Avoid close contact reduces exposure.Maintain > 1-2 metre distance from individuals with influenza-like illness. Avoid crowded spaces during outbreaks (public transport, cinemas, shops).
Stay home when sickHigh effect (source control)Infectious period: 24-48h before symptom onset until 5-7 days after. Staying home (self-isolation) prevents onward transmission.Do not go to work/school if influenza-like illness. Return only after 24-48h fever-free (without antipyretics). Reduces workplace/school outbreaks.
Surface disinfectionModerate effectInfluenza virus survives on hard surfaces (doorknobs, keyboards, phones) 24-48 hours, cloth/paper 8-12 hours. Fomite transmission contributes (hand touches contaminated surface → touches face).Disinfect frequently-touched surfaces daily during illness (doorknobs, light switches, phones, keyboards). 70% alcohol wipes or household bleach (diluted 1:100).
Facemasks (surgical masks)Modest effect in community; effective in healthcareCommunity: Meta-analyses show modest benefit (10-20% reduction in transmission, highly dependent on compliance). Healthcare: Surgical masks reduce transmission if worn by infected patient (source control) > worn by healthcare worker.Community: Limited benefit (compliance low, fit poor). Household: If caring for sick family member, surgical mask reduces transmission (both patient and carer wear). Healthcare: Surgical mask for droplet precautions, FFP3/N95 for aerosol-generating procedures.

Community Measures (Pandemic Response)

Used during pandemics or severe outbreaks to slow transmission ("flatten the curve"), buy time for vaccine development/distribution, prevent healthcare system overwhelm. Not routinely used for seasonal influenza (social/economic costs outweigh benefits in typical seasons).

MeasureEffectEvidenceUsed in Pandemics
Social distancing (reduce gatherings, maintain physical distance)High effect (reduces R₀ by 20-50%)Mathematical modelling and historical data (1918 pandemic, 2009 H1N1, COVID-19) show social distancing reduces transmission. Effect proportional to intensity and compliance.2009 H1N1 (limited use), COVID-19 (extensive use: lockdowns, 2-metre distancing, capacity limits)
School closuresModerate-high effect (children are major transmitters; schools are amplifiers)Reduces transmission 10-50% (highly variable; depends on duration, whether children still mix outside school). 2009 H1N1: School closures reduced transmission but substantial economic/social costs (parents miss work, educational disruption).1918 pandemic (cities with early school closures had lower mortality), 2009 H1N1 (reactive closures), COVID-19 (prolonged closures)
Workplace modifications (remote work, staggered shifts, sick leave policies)Moderate effectReduces workplace transmission. Flexible sick leave (paid leave, no requirement for medical certificate) encourages employees to stay home when sick (presenteeism = source of outbreaks).2009 H1N1, COVID-19 (widespread remote work)
Mask mandates (community-wide mask-wearing)Modest-moderate effect in community settingsControversial. Observational studies and RCTs show mixed results (10-30% reduction in community transmission if high compliance; minimal effect if low compliance or poor fit). Surgical masks more effective as source control (worn by infected) than protection (worn by susceptible).1918 pandemic (some cities), 2009 H1N1 (limited use), COVID-19 (widespread mandates; effectiveness debated)
Travel restrictions (screening, quarantine, border closures)Delays spread (buys time), does not prevent (inevitably breached)Historical data: Travel restrictions delay pandemic arrival by days-weeks, do not prevent. Useful to buy time for vaccine production/stockpiling, but cannot stop pandemic. High economic cost.All pandemics (1918, 1957, 1968, 2009, COVID-19). WHO generally advises against (except in extreme circumstances) due to limited effectiveness and economic harm.
Mass gatherings cancellation (concerts, sports, conferences)Moderate effectReduces super-spreading events (large gatherings amplify transmission). 1918 pandemic: Cities that banned mass gatherings had lower peak mortality.1918 pandemic, 2009 H1N1 (some cancellations), COVID-19 (widespread cancellations)

Key Principle: NPIs are layered defences ("Swiss cheese model"—no single intervention is perfect, but multiple layers reduce overall risk). Effectiveness depends on timing (early implementation more effective), intensity (strict measures more effective), and compliance (public adherence critical).


11. Special Populations

(Special population considerations for Pregnancy, Immunocompromised, Elderly, Chronic Disease patients, etc. have been comprehensively covered in the expanded sections above—Clinical Presentation §5, High-Risk Groups §2, and throughout Management §7. This structure avoids redundancy while ensuring comprehensive coverage of all key populations.)


11. Special Populations

(Special population considerations for Pregnancy, Immunocompromised, Elderly, Chronic Disease patients, etc. have been comprehensively covered in the expanded Clinical Presentation section above. This avoids redundancy while ensuring all key information is captured.)


12. Patient Education and Safety-Netting

When to Seek Urgent Medical Attention (Red Flags for Patients)

Provide clear written and verbal advice on warning signs:

Call 999 / Go to Emergency Department if:

  • Severe difficulty breathing (cannot complete sentences, gasping)
  • Lips or face turning blue
  • Chest pain (especially with shortness of breath or coughing blood)
  • Confusion, extreme drowsiness, or difficulty waking
  • Severe persistent vomiting (unable to keep fluids down for > 12 hours)
  • Very high fever (> 40°C) not improving with paracetamol/ibuprofen

Contact GP/111 Urgently if:

  • Worsening symptoms after initial improvement (especially fever returning after 3-7 days)
  • Breathing difficulties (rapid breathing, shortness of breath on minimal exertion)
  • Coughing up blood
  • Persistent high fever (> 38.5°C) for > 5 days
  • Severe headache with neck stiffness or rash
  • Unable to drink fluids or urinating infrequently
  • If you are pregnant, elderly (≥65), or have chronic medical conditions and symptoms worsening

Normal Recovery:

  • Fever resolves within 3-5 days
  • Cough and fatigue may persist 2-4 weeks (this is normal post-viral recovery)
  • Gradual improvement expected after day 5-7

Infection Prevention Advice

  • Stay home until 24-48h after fever resolves (to prevent transmission)
  • Hand hygiene: Wash hands frequently with soap and water for 20 seconds, especially after coughing/sneezing
  • Respiratory etiquette: Cover coughs and sneezes with tissue (dispose immediately) or elbow (not hands)
  • Avoid touching face (virus enters via eyes, nose, mouth)
  • Avoid close contact with vulnerable individuals (elderly, pregnant, immunocompromised) while symptomatic
  • Disinfect surfaces (doorknobs, light switches, phones) daily (virus survives 24-48h on hard surfaces)

13. Key Evidence and Guidelines

Landmark Trials and Meta-Analyses

  1. Jefferson T, et al. (2014). Neuraminidase inhibitors for preventing and treating influenza in adults and children. Cochrane Database Syst Rev. CD008965. PMID: 24718923

    • Meta-analysis of oseltamivir and zanamivir RCTs
    • Oseltamivir reduces symptom duration by 16.8 hours (95% CI 8.4-25.1h)
    • Reduces complications (pneumonia, hospitalisation) by 25-44% in high-risk groups
  2. Muthuri SG, et al. (2014). Effectiveness of neuraminidase inhibitors in reducing mortality in patients admitted to hospital with influenza A H1N1pdm09 virus infection: a meta-analysis of individual participant data. Lancet Respir Med. 2(5):395-404. PMID: 24815805

    • Individual patient data meta-analysis (n=29,234 hospitalised patients, 2009 H1N1 pandemic)
    • Oseltamivir reduces mortality by 25% (OR 0.75, 95% CI 0.66-0.86)
    • Benefit persists even if started > 48h after symptom onset (OR 0.79, 95% CI 0.65-0.95)
  3. Hayden FG, et al. (2018). Baloxavir Marboxil for Uncomplicated Influenza in Adults and Adolescents. N Engl J Med. 379(10):913-923. PMID: 30184455

    • Phase 3 RCT (n=1436)
    • Baloxavir reduces symptom duration by 26 hours vs placebo (similar to oseltamivir)
    • More rapid viral load reduction (24h vs 72h)
    • Resistance emergence in 9.7% (PA I38T mutation)
  4. Osterholm MT, et al. (2012). Efficacy and effectiveness of influenza vaccines: a systematic review and meta-analysis. Lancet Infect Dis. 12(1):36-44. PMID: 22032844

    • Meta-analysis of vaccine efficacy (n=31 studies)
    • Adults 18-65: VE 59% (95% CI 51-67%)
    • Elderly ≥65: VE 23% (95% CI 1-42%) for illness; 50-70% reduction in hospitalisation/death
    • Highlights need for improved vaccines in elderly (led to adjuvanted/high-dose vaccines)
  5. Grohskopf LA, et al. (2023). Prevention and Control of Seasonal Influenza with Vaccines: Recommendations of the Advisory Committee on Immunization Practices — United States, 2023–24 Influenza Season. MMWR Recomm Rep. 72(2):1-23. PMID: 37695879

    • Annual ACIP/CDC influenza vaccine recommendations
    • Universal vaccination recommended for all ≥6 months age
    • Specific recommendations for high-risk groups, vaccine types, timing

Guidelines

  • UK: Public Health England (PHE) / UK Health Security Agency (UKHSA). Influenza: the green book, chapter 19. (Annual updates)
  • UK: NICE. Influenza - seasonal: PH36. (2009, updated guidance on vaccination, antivirals)
  • USA: CDC. Prevention and Control of Seasonal Influenza with Vaccines. (Annual ACIP recommendations)
  • USA: IDSA. Seasonal Influenza in Adults and Children: Clinical Practice Guideline. (2009, update pending)
  • Europe: ECDC. Seasonal influenza vaccination and antiviral use in EU/EEA. (Annual technical reports)
  • Australia: Department of Health. Australian Immunisation Handbook: Influenza. (Annual updates)
  • WHO: WHO Global Influenza Surveillance and Response System (GISRS). (Ongoing surveillance, vaccine strain selection)

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[9] Jefferson T, Jones MA, Doshi P, et al. Neuraminidase inhibitors for preventing and treating influenza in adults and children. Cochrane Database Syst Rev. 2014;(4):CD008965. PMID: 24718923. DOI: 10.1002/14651858.CD008965.pub4

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Learning map

Use these linked topics to study the concept in sequence and compare related presentations.

Prerequisites

Start here if you need the foundation before this topic.

  • Viral Respiratory Infections - Overview
  • Respiratory System Immunology

Differentials

Competing diagnoses and look-alikes to compare.

  • COVID-19
  • Respiratory Syncytial Virus (RSV)
  • Common Cold (Rhinovirus)

Consequences

Complications and downstream problems to keep in mind.