Gastroenterology
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Coeliac Disease in Adults

Coeliac disease is a chronic, immune-mediated systemic disorder triggered by dietary gluten in genetically predisposed i... MRCP exam preparation.

Updated 9 Jan 2026
Reviewed 17 Jan 2026
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  • Severe malabsorption with multiple nutrient deficiencies
  • Refractory coeliac disease (Type I or Type II)
  • Suspected enteropathy-associated T-cell lymphoma (EATL)
  • Dermatitis herpetiformis with systemic involvement

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  • Irritable Bowel Syndrome
  • Non-Coeliac Gluten Sensitivity

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Clinical reference article

Coeliac Disease in Adults

1. Clinical Overview

Summary

Coeliac disease is a chronic, immune-mediated systemic disorder triggered by dietary gluten in genetically predisposed individuals carrying HLA-DQ2 or HLA-DQ8 haplotypes. [1] Ingestion of gluten (specifically gliadin peptides from wheat, barley, and rye) initiates an adaptive immune response in the small intestinal mucosa, mediated by tissue transglutaminase (tTG)-modified gliadin peptides presented to CD4+ T cells via HLA-DQ2/DQ8 molecules. [2] This results in characteristic histological changes including villous atrophy, crypt hyperplasia, and intraepithelial lymphocytosis (Marsh classification), leading to malabsorption and a spectrum of gastrointestinal and extraintestinal manifestations. [3]

The clinical phenotype ranges from classic malabsorptive disease (diarrhoea, steatorrhoea, weight loss) to non-classic presentations (iron deficiency anaemia, osteoporosis, fatigue, infertility) or entirely silent disease detected through screening of at-risk groups. [4] Diagnosis requires a combination of positive serological markers (IgA anti-tissue transglutaminase antibodies) obtained while the patient is consuming gluten, confirmed by duodenal biopsy demonstrating villous atrophy. [5] Total IgA level must be checked concurrently, as 2-3% of coeliac patients have selective IgA deficiency requiring IgG-based testing. [6]

The only established treatment is a strict, lifelong gluten-free diet (GFD), which results in clinical improvement, serological normalisation, and mucosal healing in the majority of patients. [7] Expert dietitian input is essential for successful dietary management. Untreated or poorly controlled coeliac disease carries increased risks of osteoporosis, anaemia, infertility, and malignancy, most notably enteropathy-associated T-cell lymphoma (EATL). [8]

Key Facts

ParameterDetail
DefinitionImmune-mediated enteropathy triggered by dietary gluten in genetically susceptible individuals
Prevalence1% worldwide (0.5-1.5%); 3-5 undiagnosed for every diagnosed case [9]
Genetic BasisHLA-DQ2 (90-95%) or HLA-DQ8 (5-10%); necessary but not sufficient [10]
Key EnzymeTissue transglutaminase (tTG/TG2) - deamidates gliadin peptides
PathognomonicVillous atrophy + positive serology + clinical/histological response to GFD
Gold Standard DiagnosisIgA-tTG + duodenal biopsy (while on gluten-containing diet)
First-line TreatmentStrict lifelong gluten-free diet with expert dietitian support
PrognosisExcellent with strict GFD adherence; normalised mortality after 3-5 years [8]

Clinical Pearls

IgA Deficiency Pearl: Selective IgA deficiency occurs in 2-3% of coeliac patients (10-15x higher than general population). ALWAYS check total IgA level with serology. If IgA deficient, use IgG-tTG or IgG-DGP antibodies. [6]

Gluten Challenge Pearl: Serological and histological findings require gluten exposure. Patients must consume gluten-containing diet for at least 6 weeks (ideally 3+ months with 10g gluten/day, equivalent to 4 slices bread) before testing. [5]

Dermatitis Herpetiformis Pearl: This is the pathognomonic cutaneous manifestation of coeliac disease. 100% of DH patients have coeliac enteropathy on biopsy (often subclinical). Skin biopsy shows granular IgA deposits at dermal papillae tips on direct immunofluorescence. [11]

Family Screening Pearl: First-degree relatives have 10% prevalence of coeliac disease; second-degree relatives 5%. HLA-DQ2/DQ8 testing can exclude coeliac in family members (negative predictive value > 99%). [12]

Bone Health Pearl: Osteoporosis/osteopenia affects 30-40% of newly diagnosed adults. All adults should have DEXA scan at diagnosis. Bone density improves with strict GFD and calcium/vitamin D supplementation. [13]

Oats Pearl: Pure, uncontaminated oats (certified less than 20ppm gluten) are tolerated by most (95%) coeliac patients and can be introduced after initial GFD stabilisation. Small minority develop avenin sensitivity. [14]

Why This Matters Clinically

Coeliac disease is one of the most common lifelong conditions, affecting approximately 1% of the global population, yet remains substantially underdiagnosed with an estimated 5:1 ratio of undiagnosed to diagnosed cases. [9] This "coeliac iceberg" phenomenon means that many patients experience years of preventable morbidity before diagnosis. A high index of suspicion and appropriate serological testing in at-risk groups transforms outcomes. Early diagnosis and strict dietary adherence prevent long-term complications including osteoporosis, anaemia, infertility, and the significantly increased risk of enteropathy-associated T-cell lymphoma. [8,15]


2. Epidemiology

Prevalence and Incidence

The global seroprevalence of coeliac disease is approximately 1.4%, with biopsy-confirmed prevalence of 0.7%. [9] Prevalence varies geographically and has increased over time, attributed to genuine increases in incidence, improved diagnostic awareness, and better serological testing. [16]

PopulationPrevalenceSource
General population (global)1.0% (0.5-1.5%)[9]
Europe1.0%[16]
North America0.7-1.0%[17]
Middle East/North Africa0.5-1.0%[9]
Asia (increasing recognition)0.5-1.0%[9]
First-degree relatives10% (7.5-12.5%)[12]
Second-degree relatives5%[12]
Type 1 diabetes mellitus3-8%[18]
Autoimmune thyroid disease2-5%[18]
Down syndrome5-12%[18]
Turner syndrome4-8%[18]
Williams syndrome9%[18]
Selective IgA deficiency10-15%[6]

Demographics

FactorDetail
Age at diagnosisBimodal: childhood (8-12 months after gluten introduction) and adulthood (40-60 years peak)
SexFemale predominance (1.5-2:1 in diagnosed cases; equalises when screened)
EthnicityAll ethnicities affected; historically underdiagnosed in non-European populations
Iceberg phenomenonFor every diagnosed case, 3-5 remain undiagnosed [9]
Diagnostic delayAverage 10-13 years from symptom onset to diagnosis in adults [4]

Risk Factors for Coeliac Disease

Risk FactorRelative Risk/PrevalenceEvidence
HLA-DQ2 (DQ2.5: DQA105/DQB102)Present in 90-95% of coeliacs[10]
HLA-DQ8 (DQA103/DQB103:02)Present in 5-10% (often DQ2-negative)[10]
First-degree relative with coeliac10% prevalence[12]
Type 1 diabetes mellitus3-8% prevalence[18]
Autoimmune thyroid disease2-5% prevalence[18]
Selective IgA deficiency10-15% prevalence[6]
Down syndrome (Trisomy 21)5-12% prevalence[18]
Turner syndrome4-8% prevalence[18]
Autoimmune hepatitis3-6% prevalence[18]
Primary biliary cholangitis3% prevalence[18]

Environmental Factors

While HLA-DQ2/DQ8 is necessary for coeliac disease development, only 2-3% of HLA-DQ2/DQ8-positive individuals develop disease, indicating that environmental and non-HLA genetic factors are important. [10]

Environmental FactorEvidence
Timing of gluten introductionEarlier studies suggested early (less than 4 months) or late (> 7 months) introduction increased risk; recent evidence suggests timing less important than thought [19]
BreastfeedingPreviously thought protective; recent RCTs show no protective effect [19]
Gastrointestinal infectionsRotavirus, adenovirus infections may trigger onset [2]
Gut microbiome dysbiosisAltered microbiome composition observed; causality uncertain [2]
Quantity of gluten consumedHigher gluten intake in infancy may increase risk [19]

3. Pathophysiology

Molecular Pathogenesis

The pathogenesis of coeliac disease involves a complex interplay between environmental triggers (gluten), genetic susceptibility (HLA-DQ2/DQ8), and immune dysregulation. [2,20]

Exam Detail: #### Step 1: Genetic Susceptibility (HLA-DQ2/DQ8)

The HLA class II molecules DQ2 and DQ8 are the strongest genetic risk factors for coeliac disease:

HLA HaplotypeAllelesFrequency in CoeliacsPopulation Frequency
HLA-DQ2.5 (highest risk)DQA105:01/DQB102:0190%20-30%
HLA-DQ2.2DQA102:01/DQB102:025%10-15%
HLA-DQ8DQA103:01/DQB103:025-10%10-15%
DQ2.5 homozygousDouble dose DQB1*0225% of coeliacs2%

Key concept: DQ2.5 homozygotes have 5x higher risk than heterozygotes due to enhanced gluten peptide presentation. [10]

The HLA-DQ2/DQ8 molecules have peptide-binding grooves with preference for negatively charged amino acids at specific anchor positions, explaining their affinity for deamidated gliadin peptides. [20]

Step 2: Gluten Structure and Digestion

Gluten composition:

  • Gliadin (monomeric, soluble) - primary immunogenic component
  • Glutenin (polymeric, insoluble)

Gluten proteins are uniquely rich in proline and glutamine residues, making them resistant to complete proteolytic digestion by gastric, pancreatic, and brush border enzymes. [2] The resulting peptides (particularly the immunodominant 33-mer from alpha-gliadin) reach the lamina propria intact and are highly immunogenic.

Immunodominant peptides:

  • α-gliadin 33-mer (residues 56-88): Contains multiple overlapping T-cell epitopes
  • α-gliadin p31-43: Innate immune activator
  • γ-gliadin and ω-gliadin peptides: Additional T-cell epitopes

Step 3: Intestinal Permeability and Peptide Entry

Gliadin peptides cross the intestinal epithelium via:

  1. Transcellular transport: Via CD71 (transferrin receptor)-mediated transcytosis of IgA-gliadin complexes [20]
  2. Paracellular transport: Via zonulin-mediated tight junction opening
  3. Epithelial damage: During active inflammation

Zonulin pathway: Gliadin peptides bind to CXCR3 on enterocytes, triggering zonulin release and tight junction disassembly, increasing intestinal permeability. [2]

Step 4: Tissue Transglutaminase Modification

Tissue transglutaminase (tTG/TG2) is the key enzyme in coeliac pathogenesis:

FunctionMechanismConsequence
DeamidationConverts glutamine to glutamic acid (negative charge)Enhanced binding to HLA-DQ2/DQ8
Cross-linkingCreates gliadin-tTG complexestTG becomes autoantigen target
LocationSubepithelial, released during tissue damageAvailable in lamina propria

The deamidation reaction converts neutral glutamine (Q) residues to negatively charged glutamic acid (E) residues at specific positions, creating peptides that bind with high affinity to the positively charged pockets of HLA-DQ2/DQ8. [2,20]

Key deamidation sites on α-gliadin 33-mer:

  • Q65→E65
  • Q72→E72
  • Q80→E80

Step 5: Adaptive Immune Response

Antigen Presentation:

  1. Dendritic cells in lamina propria capture deamidated gliadin peptides
  2. Peptides loaded onto HLA-DQ2/DQ8 molecules
  3. Presented to gliadin-specific CD4+ T cells

CD4+ T-Cell Response (Th1 dominant):

  • Secretion of IFN-γ (primary effector cytokine)
  • IL-21, IL-17 production
  • Activation of cytotoxic pathways
  • Help for B cells → antibody production

B-Cell Response:

  • Production of anti-gliadin antibodies (AGA)
  • Production of anti-tTG antibodies (tTG-IgA, tTG-IgG)
  • Production of anti-endomysial antibodies (EMA)
  • Anti-deamidated gliadin peptide antibodies (DGP)

Autoantibody generation: Anti-tTG antibodies arise because tTG becomes covalently linked to gliadin during deamidation, and B cells recognising gliadin-tTG complexes receive T-cell help from gliadin-specific T cells (hapten-carrier mechanism). [2]

Step 6: Innate Immune Response

In parallel with adaptive immunity, gliadin peptides (particularly p31-43) trigger innate immune responses:

ComponentEffect
IL-15 overexpressionUpregulated in epithelium and lamina propria
NK receptor upregulationNKG2D, CD94/NKG2C on IELs
MICA expressionStress ligand on enterocytes
IEL activationCytotoxic T lymphocytes kill enterocytes

IL-15 is the key innate cytokine, driving:

  • Intraepithelial lymphocyte (IEL) expansion
  • Upregulation of NKG2D on CD8+ IELs
  • MICA/MICB stress molecule expression on enterocytes
  • NK-like cytotoxicity independent of TCR recognition

This creates a "perfect storm" where adaptive immune recognition of gliadin combines with innate immune-mediated epithelial destruction. [20]

Step 7: Epithelial Damage and Villous Atrophy

The final common pathway involves:

  1. Cytotoxic IELs: CD8+ αβ and γδ T cells kill enterocytes via perforin/granzyme
  2. Apoptosis induction: Fas/FasL and MICA/NKG2D pathways
  3. Matrix remodelling: MMPs degrade basement membrane
  4. Crypt hyperplasia: Compensatory proliferation (increased crypt mitotic index)
  5. Villous atrophy: Net loss of absorptive surface area

Histological Changes: Marsh-Oberhuber Classification

The Marsh classification, modified by Oberhuber, grades the severity of small intestinal damage: [3]

StageIEL CountCrypt ArchitectureVilliClinical Significance
Marsh 0Normal (less than 25/100 enterocytes)NormalNormalNormal mucosa; pre-infiltrative
Marsh 1Increased (> 25/100 enterocytes)NormalNormalInfiltrative; seen in latent coeliac, NCGS, infections
Marsh 2IncreasedHyperplastic (elongated crypts)NormalHyperplastic; rare in isolation
Marsh 3aIncreasedHyperplasticPartial atrophy (mild blunting)Coeliac disease
Marsh 3bIncreasedHyperplasticSubtotal atrophy (marked blunting)Coeliac disease
Marsh 3cIncreasedHyperplasticTotal atrophy (flat mucosa)Severe coeliac disease

Marsh 3 (any subtype) = diagnostic of coeliac disease when combined with positive serology and clinical context.

Exam Detail: Histological features to identify:

  • Intraepithelial lymphocytes (IELs): > 25 per 100 enterocytes; predominantly CD3+CD8+ T cells; also γδ T cells
  • Crypt hyperplasia: Increased crypt depth, increased mitotic figures, crypt branching
  • Villous atrophy: Reduced villous height:crypt depth ratio (normal > 3:1)
  • Surface enterocyte changes: Loss of brush border, cuboidal rather than columnar cells
  • Lamina propria inflammation: Increased plasma cells, lymphocytes

Villous height:crypt depth ratio:

  • Normal: 3-5:1
  • Partial villous atrophy (3a): 2-3:1
  • Subtotal villous atrophy (3b): 1-2:1
  • Total villous atrophy (3c): less than 1:1 or flat mucosa

Consequences of Villous Atrophy

ConsequenceMechanismClinical Manifestation
Reduced absorptive surfaceLoss of villiMalabsorption of all nutrients
Iron deficiencyDuodenal absorption (Fe2+)Microcytic anaemia (most common)
Folate deficiencyJejunal absorptionMegaloblastic anaemia
Vitamin B12 deficiencyTerminal ileum (if extensive)Megaloblastic anaemia, neuropathy
Calcium/Vitamin D malabsorptionFat-soluble vitamin lossOsteoporosis, osteomalacia
Fat malabsorptionReduced bile salt absorptionSteatorrhoea
Lactase deficiencyBrush border enzyme lossSecondary lactose intolerance
HypoproteinaemiaProtein malabsorptionOedema (rare, severe cases)

4. Clinical Presentation

Coeliac disease has a highly variable clinical phenotype. The Oslo definitions classify presentations into distinct categories: [1]

Classification of Clinical Presentations

CategoryDefinitionProportion
Classical coeliac diseaseMalabsorption syndrome: diarrhoea, steatorrhoea, weight loss30-40%
Non-classical coeliac diseaseSymptomatic without malabsorption: anaemia, osteoporosis, fatigue50-60%
Subclinical (silent) coeliac diseaseNo apparent symptoms; detected by screening at-risk groups10-20%
Potential coeliac diseasePositive serology, normal biopsy, HLA-DQ2/DQ8+Variable

Gastrointestinal Symptoms

SymptomFrequencyCharacteristics
Chronic diarrhoea50-70%Watery, voluminous; steatorrhoea in severe cases
Abdominal bloating/distension50-60%Postprandial; improved with GFD
Abdominal pain40-50%Diffuse, cramping; periumbilical
Flatulence40-50%From carbohydrate fermentation
Nausea20-30%Especially after gluten-rich meals
Steatorrhoea20-30%Pale, bulky, foul-smelling, floating stools
Constipation10-20%Increasingly recognised presentation
Weight loss30-40%May be subtle or profound
Aphthous stomatitis10-20%Recurrent oral ulcers

Extraintestinal Manifestations

Exam Detail: #### Haematological | Manifestation | Frequency | Mechanism | |---------------|-----------|-----------| | Iron deficiency anaemia | 30-50% (most common adult presentation) | Duodenal iron malabsorption | | Folate deficiency | 20-40% | Jejunal folate malabsorption | | Vitamin B12 deficiency | 5-20% | Less common; terminal ileum usually spared | | Thrombocytosis | Variable | Reactive; iron deficiency | | Hyposplenism | 30-50% | Functional hyposplenism; mechanism unclear |

Bone and Metabolic

ManifestationFrequencyMechanism
Osteopenia/osteoporosis30-40% at diagnosisCalcium/vitamin D malabsorption; cytokine-mediated
Osteomalacia10%Vitamin D deficiency
Pathological fracturesIncreased risk (1.4x)Low bone mineral density
Hypocalcaemia20%Malabsorption
Secondary hyperparathyroidism20-30%Compensatory to hypocalcaemia

Neurological

ManifestationFrequencyMechanism
Peripheral neuropathy5-10%Nutritional (B12, copper) and/or autoimmune
Gluten ataxia2-5%Autoimmune cerebellar degeneration; anti-gliadin antibodies
Headache/migraine10-20%Unclear mechanism
EpilepsyIncreasedEspecially with occipital calcifications
Brain fog/cognitive dysfunctionCommonImproves with GFD

Reproductive

ManifestationFrequencyMechanism
Infertility (female)Increased (OR 3-4)Improves with GFD
Recurrent miscarriageIncreased (OR 3-9)Nutrient deficiency, autoimmune
Delayed menarcheChildhood-onsetMalnutrition
AmenorrhoeaSecondaryNutritional
Intrauterine growth restrictionIncreasedMaternal malabsorption
Male infertilityIncreasedZinc deficiency, autoimmune

Dermatological

ManifestationFrequencyMechanism
Dermatitis herpetiformis15-25% lifetime riskCutaneous IgA deposition
Alopecia areataIncreasedAutoimmune association
PsoriasisIncreasedShared autoimmune pathways

Hepatic

ManifestationFrequencyMechanism
Elevated transaminases10-40%"Coeliac hepatitis"; usually mild, reversible with GFD
Autoimmune hepatitis3-6% associationShared autoimmunity
Primary biliary cholangitis3% associationShared autoimmunity

Dental

ManifestationFrequencyMechanism
Dental enamel defects10-50% (if childhood onset)Hypoplasia from malnutrition
Recurrent aphthous ulcers10-20%Autoimmune/nutritional

Associated Autoimmune Conditions

Coeliac disease associates with numerous autoimmune conditions, sharing HLA and non-HLA genetic risk loci: [18]

Associated ConditionPrevalence in Coeliac PatientsBidirectional?
Type 1 diabetes mellitus3-8% (screen all T1DM)Yes
Autoimmune thyroiditis (Hashimoto's)2-5%Yes
Autoimmune hepatitis3-6%Yes
Dermatitis herpetiformis15-25% lifetimeDH = coeliac
Primary biliary cholangitis3%Yes
Sjögren's syndrome3-5%Yes
IgA nephropathyIncreasedYes
Addison's diseaseIncreasedYes
Rheumatoid arthritisIncreasedYes
Systemic lupus erythematosusIncreasedYes

Red Flags Requiring Urgent Assessment

[!CAUTION] Urgent referral and investigation required for:

  • Severe, unexplained weight loss or malnutrition
  • Failure to respond to strict gluten-free diet after 6-12 months (refractory coeliac disease)
  • New abdominal pain, mass, or lymphadenopathy (concern for EATL)
  • Severe or widespread dermatitis herpetiformis
  • Progressive neurological symptoms (ataxia, neuropathy)
  • Recurrent small bowel obstruction
  • GI bleeding without obvious cause

5. Clinical Examination

General Inspection

FindingSignificance
PallorAnaemia (iron, folate, B12 deficiency)
Cachexia/weight lossSevere malabsorption
Short statureChildhood-onset untreated coeliac
OedemaHypoproteinaemia (rare, severe)
Angular stomatitisIron/B12/folate deficiency
GlossitisSmooth, red tongue; iron/B12/folate deficiency

Skin Examination

FindingLocationDescription
Dermatitis herpetiformisExtensor surfaces (elbows, knees, buttocks, shoulders, scalp)Intensely pruritic, grouped vesicles on erythematous base; excoriations common
BruisingGeneralisedVitamin K deficiency
Poor wound healingAnyProtein/zinc malnutrition

Abdominal Examination

FindingSignificance
Abdominal distensionBloating, gaseous distension
Hyperactive bowel soundsIncreased peristalsis
Mild generalised tendernessNon-specific
HepatomegalyFatty liver; rarely, autoimmune hepatitis
No specific massesMasses suggest complication (lymphoma)

Other Systems

SystemFindingSignificance
NailsKoilonychiaIron deficiency
MouthAphthous ulcersRecurrent; improves with GFD
Angular stomatitisNutrient deficiency
GlossitisSmooth tongue
Dental enamel defectsChildhood onset
NeurologicalPeripheral neuropathyGlove-and-stocking sensory loss
Cerebellar signsGluten ataxia (ataxia, nystagmus, dysarthria)
MusculoskeletalBone tendernessOsteomalacia
Proximal myopathyVitamin D deficiency
TetanyHypocalcaemia

6. Investigations

Diagnostic Algorithm

The diagnosis of coeliac disease requires serological testing followed by duodenal biopsy, both performed while the patient is consuming a gluten-containing diet. [5]

              SUSPECTED COELIAC DISEASE
                        │
                        ▼
┌───────────────────────────────────────────────────────────┐
│  STEP 1: SEROLOGICAL TESTING (while on gluten)           │
│  • IgA-tTG (first-line)                                  │
│  • Total IgA level (to exclude IgA deficiency)           │
└───────────────────────────────────────────────────────────┘
                        │
         ┌──────────────┼──────────────┐
         ▼              ▼              ▼
   IgA-tTG         IgA-tTG        IgA deficient
   POSITIVE        NEGATIVE       (less than 0.07 g/L)
         │              │              │
         ▼              │              ▼
┌─────────────────┐     │    ┌─────────────────────┐
│ Refer for       │     │    │ Request IgG-tTG     │
│ duodenal biopsy │     │    │ and/or IgG-DGP      │
└─────────────────┘     │    └─────────────────────┘
         │              │              │
         ▼              ▼              ▼
┌───────────────────────────────────────────────────────────┐
│  STEP 2: DUODENAL BIOPSY (≥4 D2 + 1-2 bulb biopsies)     │
│  • Villous atrophy (Marsh 3a-3c) = DIAGNOSTIC            │
│  • Marsh 1-2 alone: consider other causes                │
└───────────────────────────────────────────────────────────┘
         │
         ▼
   ┌─────────────────────────────────────────────────────┐
   │  BIOPSY SHOWS MARSH 3 + POSITIVE SEROLOGY           │
   │                    │                                │
   │                    ▼                                │
   │        COELIAC DISEASE CONFIRMED                    │
   │  • Initiate strict gluten-free diet                 │
   │  • Essential: expert dietitian referral             │
   │  • Baseline nutritional assessment                  │
   │  • DEXA scan                                        │
   │  • Discuss family screening                         │
   │  • Pneumococcal vaccination                         │
   │  • Follow-up serology at 6-12 months                │
   └─────────────────────────────────────────────────────┘

Serological Testing

First-Line: IgA Tissue Transglutaminase (IgA-tTG)

ParameterValue
Sensitivity95-98% [5]
Specificity95-98% [5]
Positive predictive value80-90% (population dependent)
Negative predictive value> 99%

Critical requirements:

  • Patient must be consuming gluten (≥3g/day for ≥6 weeks, ideally 10g/day for 3+ months)
  • Always check total IgA level concurrently (2-3% of coeliacs are IgA deficient)
  • High titres (> 10x ULN) strongly predictive of coeliac disease

In IgA Deficiency (Total IgA less than 0.07 g/L)

Use IgG-based testing:

  • IgG-tTG: Sensitivity 90-95%, specificity 95%
  • IgG-DGP (deamidated gliadin peptide): Sensitivity 90-95%, specificity 95%

Other Serological Tests

TestUseSensitivity/Specificity
Anti-endomysial antibody (EMA-IgA)Confirmatory; highly specific90-95% / 99%
IgA-DGPChildren less than 2 years; IgA deficiency85-95% / 90-95%
Anti-gliadin antibodies (AGA)Obsolete; low specificityNot recommended

Exam Detail: False positives for tTG:

  • Autoimmune diseases (SLE, RA)
  • Chronic liver disease
  • Heart failure
  • Infections (rarely)
  • Inflammatory bowel disease

False negatives for tTG:

  • IgA deficiency (check total IgA!)
  • Gluten-free diet prior to testing
  • Immunosuppression
  • Age less than 2 years (use DGP)
  • Very early disease

HLA Typing (DQ2/DQ8)

ApplicationRationale
Exclude coeliac diseaseNegative DQ2/DQ8 has > 99% NPV; essentially excludes coeliac
Family screeningHLA-negative relatives can be reassured
Uncertain diagnosisSupports or refutes diagnosis when serology/biopsy equivocal
Already on GFDHelps clarify prior to gluten challenge
Potential coeliac diseaseRisk stratification for monitoring

Important: Positive HLA-DQ2/DQ8 does NOT confirm coeliac disease (30-40% of population positive).

Duodenal Biopsy

Gold standard for diagnosis. [5]

RequirementDetail
Number of biopsiesMinimum 4 from D2 + 1-2 from duodenal bulb
Why multiple sites?Patchy disease; bulb-only involvement in 9-13%
Gluten exposureMust be on gluten-containing diet (≥6 weeks, ideally ≥3 months)
Histological criteriaIncreased IELs (> 25/100 enterocytes) + villous atrophy (Marsh 3)

Exam Detail: Biopsy technique:

  1. Oesophagogastroduodenoscopy (OGD)
  2. Multiple biopsies using standard forceps
  3. Orient biopsies correctly (villous surface up)
  4. Biopsies from D2 (4+) and duodenal bulb (1-2)
  5. Submit in formalin; specify "query coeliac disease"

Histopathological assessment:

  • IEL count (CD3 immunostaining if needed)
  • Villous:crypt ratio
  • Crypt hyperplasia
  • Surface enterocyte morphology
  • Lamina propria inflammation
  • Marsh-Oberhuber classification

Pitfalls in biopsy interpretation:

  • Poor orientation
  • Tangential sectioning
  • Peptic duodenitis mimicking changes
  • Inadequate number of biopsies
  • Patient already on GFD

Other causes of villous atrophy (differential):

  • Tropical sprue
  • Giardiasis
  • Common variable immunodeficiency
  • Autoimmune enteropathy
  • Drugs (olmesartan, mycophenolate)
  • Crohn's disease
  • Small bowel bacterial overgrowth
  • HIV enteropathy
  • Whipple's disease
  • Eosinophilic enteritis

No-Biopsy Diagnosis (Selected Cases)

ESPGHAN 2020 guidelines (primarily paediatric, increasingly applied to adults): [5]

Biopsy may be omitted if ALL of the following criteria met:

  1. IgA-tTG > 10x upper limit of normal
  2. Positive EMA-IgA (on separate sample)
  3. Positive HLA-DQ2 or DQ8
  4. Symptomatic (classical or non-classical symptoms)
  5. Full understanding and acceptance by patient/family

BSG guidelines recommend confirmatory biopsy remains standard of care in adults.

Baseline Investigations at Diagnosis

InvestigationPurpose
Full blood countAnaemia (microcytic, macrocytic, or mixed)
Iron studiesFerritin, serum iron, TIBC
Vitamin B12Deficiency common
FolateRed cell folate preferred
Calcium, phosphateBone metabolism
25-OH Vitamin DDeficiency universal
PTHSecondary hyperparathyroidism
Liver function testsElevated transaminases ("coeliac hepatitis")
Thyroid function (TSH)Autoimmune thyroid disease association
DEXA scanOsteoporosis screening (mandatory in adults)
HbA1c or glucoseT1DM screening if indicated

7. Classification and Staging

Oslo Definitions (2012) [1]

TermDefinition
Coeliac diseaseImmune-mediated systemic disorder elicited by gluten in genetically susceptible individuals, characterised by presence of gluten-dependent antibodies and HLA-DQ2/DQ8, with enteropathy
Classical coeliac diseasePresents with signs/symptoms of malabsorption (diarrhoea, steatorrhoea, weight loss)
Non-classical coeliac diseaseSymptomatic but without malabsorption (anaemia, osteoporosis, elevated LFTs, neurological symptoms)
Subclinical (silent) coeliac diseaseBelow threshold of clinical detection; identified by screening
Potential coeliac diseasePositive serology, normal biopsy; at risk of developing enteropathy
Refractory coeliac diseasePersistent symptoms and villous atrophy despite strict GFD for > 12 months
Latent coeliac diseaseHLA-DQ2/DQ8+ with normal biopsy; had coeliac in past or will develop later

Marsh-Oberhuber Classification

See Section 3 (Pathophysiology) for detailed classification.

Refractory Coeliac Disease Classification [21]

TypeIntraepithelial Lymphocyte PhenotypePrognosis
Type I (RCD-I)Polyclonal, normal phenotype (CD3+CD8+)Good; 80-90% 5-year survival
Type II (RCD-II)Aberrant/clonal phenotype (CD3+CD8-, intracellular CD3+, surface CD3-)Poor; 40-50% 5-year survival; precursor to EATL

8. Management

Management Overview

              CONFIRMED COELIAC DISEASE
                        │
    ┌───────────────────┼───────────────────┐
    │                   │                   │
    ▼                   ▼                   ▼
DIETARY             NUTRITIONAL        MONITORING
TREATMENT           SUPPORT            & SCREENING
    │                   │                   │
    ▼                   ▼                   ▼
┌──────────────┐ ┌─────────────────┐ ┌─────────────────┐
│ Strict       │ │ Dietitian       │ │ Serology        │
│ gluten-free  │ │ referral        │ │ at 6-12 months  │
│ diet         │ │ (ESSENTIAL)     │ │                 │
│              │ │                 │ │ Annual clinical │
│ Lifelong     │ │ Nutritional     │ │ review          │
│              │ │ supplementation │ │                 │
│ Education    │ │ (iron, Ca, D)   │ │ DEXA scan       │
│              │ │                 │ │                 │
│ Support      │ │ Bone health     │ │ Family screening│
│ groups       │ │                 │ │                 │
│              │ │ Vaccinations    │ │ Consider repeat │
│ Coeliac UK   │ │                 │ │ biopsy if non-  │
│              │ │                 │ │ responsive      │
└──────────────┘ └─────────────────┘ └─────────────────┘

Gluten-Free Diet (GFD)

The cornerstone of treatment is a strict, lifelong gluten-free diet. [7]

Foods to AVOID (Contain Gluten)

SourceExamples
Wheat (including spelt, kamut, durum, semolina)Bread, pasta, cereals, cakes, biscuits, pastries, couscous, bulgur
BarleyBeer, malt, malt extract, malt vinegar
RyeRye bread, rye crackers, some whiskeys
Contaminated oatsRegular commercial oats (cross-contaminated)
Hidden sourcesSauces, gravies, soups, processed foods, medications, communion wafers, some cosmetics (lipstick)

Safe Foods (Gluten-Free)

CategoryExamples
Naturally gluten-free grainsRice, corn/maize, quinoa, millet, buckwheat, amaranth, sorghum, teff
Protein sourcesFresh meat, poultry, fish, eggs, legumes (unprocessed)
DairyMilk, cheese, yoghurt (check additives in processed dairy)
Fruits and vegetablesAll fresh fruits and vegetables
FatsOils, butter
Pure oatsCertified gluten-free oats (less than 20ppm); tolerated by 95% of coeliacs [14]
Labelled gluten-free productsMust contain less than 20ppm gluten (Codex Alimentarius standard)

Exam Detail: #### Gluten Thresholds

StandardDefinition
Gluten-freeless than 20 parts per million (ppm) gluten
Very low gluten20-100 ppm gluten
Daily toleranceMost coeliacs tolerate less than 10mg gluten/day without mucosal damage
Detectable damageOccurs with > 50mg/day gluten exposure

Oats in Coeliac Disease [14]

  • Pure, uncontaminated oats (certified less than 20ppm) are safe for 95% of coeliacs
  • Introduce after initial GFD stabilisation (6-12 months)
  • Limit to 50g dry oats/day
  • 5% of patients develop avenin sensitivity (oat storage protein)
  • Monitor clinically and serologically after introduction

Dietitian Referral (ESSENTIAL)

Expert dietitian input is MANDATORY for successful management. [7]

Role of DietitianDetails
EducationGluten-containing foods, reading labels, hidden sources
Nutritional adequacyEnsure balanced diet; GFD can be low in fibre, iron, B vitamins
Cross-contaminationKitchen hygiene, eating out, travel
Lifestyle supportSocial situations, schools/workplaces, travel
Monitoring adherenceDietary assessment, troubleshooting non-response
Oat introductionWhen and how to safely trial pure oats

Nutritional Supplementation

DeficiencyRecommended TreatmentDuration
Iron deficiencyFerrous sulphate 200mg BD-TDS (or IV iron if malabsorption)Until replete + 3 months
Folate deficiencyFolic acid 5mg dailyUntil replete
Vitamin B12 deficiencyHydroxocobalamin 1mg IM (loading then maintenance)As per protocol
Vitamin D deficiencyColecalciferol 800-4000 IU daily (higher doses if severe)Lifelong if at risk
Calcium1000-1200 mg daily (diet + supplements)Lifelong
ZincZinc sulphate 45mg daily (if deficient)Until replete

Bone Health Management [13]

RecommendationDetail
DEXA scan at diagnosisAll adults; osteoporosis in 30-40%
Calcium/vitamin DAll patients: Ca 1000-1200mg/day, Vitamin D 800-2000 IU/day
Repeat DEXAAt 1-2 years on GFD if osteoporosis/osteopenia at baseline
BisphosphonatesConsider if T-score ≤-2.5 and/or fragility fracture
LifestyleWeight-bearing exercise, smoking cessation, limit alcohol

Vaccinations [7]

VaccineRationale
Pneumococcal vaccineFunctional hyposplenism (30-50% of coeliacs); PPV23 + PCV13
Influenza (annual)Recommended
Haemophilus influenzae type bConsider in asplenic/hyposplenic patients
MeningococcalConsider if travel/exposure risk

Follow-Up and Monitoring

TimepointAssessmentAction
At diagnosisBaseline bloods, DEXA, dietitian referralEstablish treatment plan
4-6 weeksInitial dietitian reviewReinforce education; troubleshoot
3-6 monthsSymptom review; adherence assessmentAdjust plan as needed
6-12 monthsRepeat serology (tTG should fall > 50%)Confirms dietary adherence
AnnuallyClinical review; serology if indicatedOngoing support
Non-responseReview adherence; repeat biopsyExclude refractory coeliac, other causes

Exam Detail: #### Monitoring Response to GFD

Symptomatic response:

  • GI symptoms typically improve within 2-4 weeks
  • Fatigue, other symptoms over weeks to months

Serological response:

  • tTG-IgA should decrease by ≥50% at 6-12 months
  • May normalise by 12-24 months
  • Persistent elevation suggests ongoing gluten exposure

Histological response:

  • Mucosal healing occurs over 6-24 months
  • May take longer in adults (1-2 years)
  • Repeat biopsy not routinely required unless non-responsive

Definition of non-responsive coeliac disease (NRCD):

  • Persistent symptoms and/or
  • Persistently elevated serology and/or
  • Persistent villous atrophy despite ostensibly strict GFD for ≥12 months

Causes of NRCD (in order of frequency):

  1. Ongoing gluten exposure (most common: 50-70%)
  2. Incorrect initial diagnosis (7-10%)
  3. Concomitant conditions (IBS, lactose intolerance, SIBO, microscopic colitis) (10-30%)
  4. Refractory coeliac disease Type I (less than 10%)
  5. Refractory coeliac disease Type II (less than 2%)

Special Populations

Pregnancy [22]

ConsiderationRecommendation
Pre-conception counsellingEnsure strict GFD; optimise nutrition
Folic acid400mcg (5mg if history of NTD)
Monitor nutritional statusIron, B12, folate, calcium
Avoid gluten challengeDo not perform during pregnancy
BreastfeedingGFD safe and recommended
Offspring screeningHLA typing or serology if symptomatic

Elderly

ConsiderationRecommendation
Higher index of suspicionOften non-classical presentation
Nutrition priorityMay already be malnourished
Bone healthHigher fracture risk
PolypharmacyCheck medications for gluten
Practical supportHelp with food preparation

9. Complications

Malignancy [8,15]

MalignancyRelative RiskNotes
Enteropathy-associated T-cell lymphoma (EATL)6-30xRare but serious; Type I EATL from RCD-II
Non-Hodgkin lymphoma (other)2-6xVarious sites
Small bowel adenocarcinoma10-30xRare overall
Oesophageal squamous cell carcinoma2-3x
Overall cancer mortality1.3-1.4xNormalises with strict GFD after 3-5 years

Exam Detail: #### Enteropathy-Associated T-Cell Lymphoma (EATL) [15]

FeatureDetail
TypeAggressive non-Hodgkin T-cell lymphoma arising from IELs
ClassificationType I (60%, HLA-linked, from RCD-II) and Type II (15%, not HLA-linked)
PresentationWeight loss, abdominal pain, diarrhoea, obstruction, perforation
Risk factorsOlder age at diagnosis, non-adherence to GFD, RCD-II, severe initial presentation
DiagnosisCT/MRI, PET-CT, capsule endoscopy, deep enteroscopy with biopsy
PrognosisPoor: 5-year survival 10-20%
PreventionStrict lifelong GFD (reduces risk by 90%+)

Warning signs:

  • Unexplained weight loss
  • New or worsening abdominal pain
  • GI bleeding or obstruction
  • B symptoms (fever, night sweats)
  • Failure to respond to GFD (RCD-II)

Refractory Coeliac Disease (RCD) [21]

TypeCharacteristicsManagementPrognosis
RCD Type INormal IEL phenotype (polyclonal); exclusion of other causesCorticosteroids (budesonide 9mg/day or prednisolone), azathioprine, infliximab (trial)Good; 80-90% 5-year survival
RCD Type IIAberrant IEL phenotype (clonal, CD3+CD8-); pre-lymphomatousCladribine, autologous stem cell transplant, clinical trialsPoor; 40-50% 5-year survival; 50% develop EATL within 5 years

Investigation of suspected RCD:

  1. Confirm strict GFD adherence (dietitian assessment)
  2. Repeat duodenal biopsy (persistent villous atrophy)
  3. IEL immunophenotyping (flow cytometry)
  4. T-cell receptor gene rearrangement (clonality)
  5. Small bowel imaging (CT/MRI, capsule endoscopy)
  6. PET-CT if lymphoma suspected

Other Complications

ComplicationIncidencePrevention/Management
Osteoporosis30-40% at diagnosisDEXA scan; calcium/vitamin D; bisphosphonates if needed; strict GFD
Fractures1.4x increased riskBone health optimisation
Anaemia30-50%Iron, folate, B12 replacement
Hyposplenism30-50%Pneumococcal vaccination; awareness of infection risk
InfertilityOR 3-4x (female)GFD improves fertility; optimise nutrition
Recurrent miscarriageOR 3-9xStrict GFD
Neurological5-10%May be irreversible; strict GFD
Secondary autoimmune diseaseIncreasedLonger gluten exposure increases risk

Dermatitis Herpetiformis [11]

FeatureDetail
DefinitionCutaneous manifestation of coeliac disease with dermal IgA deposits
PresentationIntensely pruritic papulovesicular eruption on extensor surfaces
DistributionElbows, knees, buttocks, shoulders, scalp, face
DiagnosisSkin biopsy (perilesional) with direct immunofluorescence showing granular IgA at dermal papillae
Gut involvement100% have coeliac enteropathy on biopsy (often subclinical)
TreatmentStrict GFD (primary); dapsone for symptom control (50-150mg/day)
ResponseSkin lesions may take 6-24 months to respond to GFD; dapsone provides rapid relief
MonitoringG6PD screen before dapsone; FBC (haemolysis, methaemoglobinaemia)

10. Prognosis and Outcomes

Response to Gluten-Free Diet [7]

ParameterExpected Response
SymptomsImprove within 2-4 weeks
SerologyNormalises by 6-24 months
HistologyMucosal healing 6-24 months (may take longer in adults)
Bone densityImproves over 1-3 years
FertilityImproves with strict GFD
NeurologicalVariable; may be irreversible

Long-Term Outcomes [8]

OutcomeDetail
Life expectancyNormal with strict GFD adherence after 3-5 years
All-cause mortality1.2-1.4x increased if diagnosed (normalises with time on GFD)
Cancer mortality1.3x increased; primarily lymphoma; reduces with GFD
Cardiovascular mortalityNot increased
Quality of lifeImproves significantly on GFD; dietary burden can be challenging

Prognostic Factors

Good PrognosisPoor Prognosis
Early diagnosisLate diagnosis (> 50 years)
Strict GFD adherencePoor adherence
Good histological responsePersistent villous atrophy
No complications at diagnosisRCD-II
Younger ageMalignancy at presentation

11. Prevention and Screening

Primary Prevention

Currently, no proven strategies to prevent coeliac disease development. [19]

StrategyEvidence
Timing of gluten introductionNo clear benefit from delayed introduction
BreastfeedingNot protective (PREVENT-CD, CELIPREV trials)
Amount of glutenHigh intake may increase risk
ProbioticsInsufficient evidence

Screening Recommendations

Who to screen:

GroupRecommendationEvidence
First-degree relativesOffer serological testing10% prevalence
Type 1 diabetesScreen at diagnosis and periodically3-8% prevalence
Autoimmune thyroid diseaseConsider screening if symptomatic2-5% prevalence
Down syndromeScreen5-12% prevalence
Turner syndromeScreen4-8% prevalence
IgA deficiencyScreen (use IgG-based testing)10-15% prevalence
Unexplained iron deficiency anaemiaScreenHigh yield
Unexplained osteoporosisScreenHigh yield
Unexplained elevated transaminasesScreenHigh yield
Irritable bowel syndromeConsider screening (NICE)4-7% prevalence in IBS

12. Key Guidelines

BSG Guidelines (2021) [7]

Key recommendations:

  1. First-line test: IgA-tTG with total IgA
  2. Duodenal biopsy remains standard for adult diagnosis
  3. Minimum 4 biopsies from D2 + 1-2 from duodenal bulb
  4. Lifelong strict GFD as sole treatment
  5. Expert dietitian referral essential
  6. DEXA scan for all adults at diagnosis
  7. Annual follow-up recommended
  8. Pneumococcal vaccination for hyposplenism

NICE NG20 (2015, updated 2022) [23]

Key recommendations:

  1. Screen high-risk groups (IBS, Type 1 diabetes, autoimmune thyroid, first-degree relatives)
  2. Test IgA-tTG with total IgA
  3. Refer for biopsy if positive serology
  4. Do not start GFD before diagnosis confirmed
  5. Offer DEXA to adults at diagnosis
  6. Consider repeat biopsy if non-responsive

ACG Guidelines (2023) [17]

Key recommendations:

  1. IgA-tTG as first-line test
  2. Confirm diagnosis with duodenal biopsy (≥4 biopsies)
  3. Gluten-free diet is currently the only effective treatment
  4. Screen first-degree relatives, T1DM, autoimmune thyroid
  5. Monitor adherence with dietitian support
  6. Assess for refractory disease if non-responsive

ESPGHAN Guidelines (2020) [5]

Key recommendations:

  1. No-biopsy diagnosis acceptable in children with IgA-tTG > 10x ULN + positive EMA + HLA-DQ2/DQ8 + symptoms
  2. Adults: biopsy still recommended for diagnosis
  3. Total IgA essential to exclude deficiency
  4. HLA typing useful for exclusion

13. Exam-Focused Content

Common MRCP/FRACP Questions

  1. "What is the pathophysiology of coeliac disease?"
  2. "How would you investigate suspected coeliac disease?"
  3. "A patient with known coeliac disease is not responding to GFD. What are the causes and your approach?"
  4. "What complications are associated with coeliac disease?"
  5. "Who should be screened for coeliac disease?"
  6. "Describe the Marsh classification."
  7. "What is the significance of HLA-DQ2/DQ8 testing?"
  8. "How would you manage a patient with refractory coeliac disease?"

Viva Points

Viva Point: Opening statement: "Coeliac disease is a chronic immune-mediated enteropathy triggered by dietary gluten in genetically susceptible individuals carrying HLA-DQ2 or HLA-DQ8 haplotypes. It has a prevalence of approximately 1% worldwide and is characterised by villous atrophy on duodenal biopsy, positive anti-tissue transglutaminase antibodies, and clinical response to a strict gluten-free diet."

Key facts to articulate:

  • Prevalence 1%; 5 undiagnosed for every diagnosed case
  • HLA-DQ2 (90-95%) or HLA-DQ8 (5-10%) necessary but not sufficient
  • Tissue transglutaminase deamidates gliadin → enhanced HLA-DQ2/DQ8 binding → CD4+ T-cell activation
  • Diagnosis: IgA-tTG (sensitivity/specificity 95-98%) + duodenal biopsy (Marsh 3)
  • Always check total IgA (2-3% IgA deficient)
  • Treatment: strict lifelong GFD + expert dietitian
  • Complications: osteoporosis, anaemia, EATL, refractory coeliac disease
  • Strict GFD normalises mortality after 3-5 years

Model Answers

Q: A 35-year-old woman presents with fatigue and is found to have iron deficiency anaemia. How would you approach suspected coeliac disease?

A: "I would approach this systematically. Iron deficiency anaemia is the most common presentation of coeliac disease in adults, affecting 30-50% at diagnosis.

First, I would take a detailed history focusing on GI symptoms (diarrhoea, bloating, abdominal pain), extraintestinal features (fatigue, bone pain, skin rash), and family history of coeliac disease or autoimmunity.

For investigation, I would request IgA tissue transglutaminase (IgA-tTG) as the first-line serological test, along with total IgA level to exclude IgA deficiency. The patient must be consuming a gluten-containing diet for accurate results.

If IgA-tTG is positive, I would refer for upper GI endoscopy with duodenal biopsies – at least 4 from D2 and 1-2 from the duodenal bulb – looking for villous atrophy (Marsh 3 classification).

If confirmed, I would initiate a strict gluten-free diet with essential dietitian referral, arrange baseline nutritional investigations (ferritin, B12, folate, calcium, vitamin D, LFTs, TFTs), perform a DEXA scan for osteoporosis screening, ensure pneumococcal vaccination for hyposplenism, and discuss family screening.

Follow-up would include repeat serology at 6-12 months, which should show falling antibody titres, and annual review thereafter."

Q: What are the causes of non-responsive coeliac disease?

A: "Non-responsive coeliac disease is defined as persistent symptoms, elevated serology, or villous atrophy despite an ostensibly strict gluten-free diet for 12 months or more.

The causes, in order of frequency, are:

  1. Ongoing gluten exposure – the most common cause (50-70%), often inadvertent from hidden sources
  2. Incorrect initial diagnosis – other causes of villous atrophy such as tropical sprue, giardiasis, CVID
  3. Concomitant conditions – lactose intolerance, IBS, small intestinal bacterial overgrowth, microscopic colitis, exocrine pancreatic insufficiency
  4. Refractory coeliac disease Type I – persistent villous atrophy with polyclonal IELs despite strict GFD
  5. Refractory coeliac disease Type II – aberrant clonal IEL expansion; pre-lymphomatous condition with poor prognosis

My approach would be: confirm dietary adherence with expert dietitian assessment, repeat duodenal biopsy, test for other causes, and if RCD suspected, perform IEL immunophenotyping and TCR gene rearrangement studies."

Common Mistakes

Mistakes that fail candidates:

  • Testing serology when patient already on GFD (false negative)
  • Not checking total IgA level (miss IgA-deficient patients)
  • Taking insufficient biopsies (miss patchy disease)
  • Not biopsying the duodenal bulb (bulb-only disease in 9-13%)
  • Diagnosing coeliac without villous atrophy (Marsh 1-2 alone is insufficient)
  • Not referring to expert dietitian
  • Forgetting to screen for osteoporosis (DEXA)
  • Forgetting pneumococcal vaccination (hyposplenism)
  • Missing hidden gluten sources as cause of non-response

Differential Diagnosis

ConditionDistinguishing Features
Irritable bowel syndromeNormal serology, normal biopsy, symptom-based diagnosis (Rome IV)
Non-coeliac gluten sensitivityNegative serology, normal biopsy, symptom response to GFD
Lactose intoleranceLactose hydrogen breath test positive; often secondary in coeliac
Small intestinal bacterial overgrowthGlucose/lactulose breath test positive; bloating predominant
Inflammatory bowel diseaseColonoscopy/ileoscopy with biopsies; inflammatory markers
Microscopic colitisNormal colonoscopy but diagnostic colonic biopsies
Tropical sprueTravel history; responds to antibiotics and folate
GiardiasisStool microscopy/antigen; travel history
Common variable immunodeficiencyLow immunoglobulins; recurrent infections
Autoimmune enteropathyAnti-enterocyte antibodies; often severe
Drug-induced enteropathyHistory of olmesartan, mycophenolate, other drugs

14. References

  1. Ludvigsson JF, Leffler DA, Bai JC, et al. The Oslo definitions for coeliac disease and related terms. Gut. 2013;62(1):43-52. doi:10.1136/gutjnl-2011-301346

  2. Sollid LM, Jabri B. Triggers and drivers of autoimmunity: lessons from coeliac disease. Nat Rev Immunol. 2013;13(4):294-302. doi:10.1038/nri3407

  3. Marsh MN. Gluten, major histocompatibility complex, and the small intestine. A molecular and immunobiologic approach to the spectrum of gluten sensitivity ('celiac sprue'). Gastroenterology. 1992;102(1):330-354. doi:10.1016/0016-5085(92)91819-P

  4. Lebwohl B, Sanders DS, Green PHR. Coeliac disease. Lancet. 2018;391(10115):70-81. doi:10.1016/S0140-6736(17)31796-8

  5. Husby S, Koletzko S, Korponay-Szabó I, et al. European Society Paediatric Gastroenterology, Hepatology and Nutrition Guidelines for Diagnosing Coeliac Disease 2020. J Pediatr Gastroenterol Nutr. 2020;70(1):141-156. doi:10.1097/MPG.0000000000002497

  6. Chow MA, Lebwohl B, Reilly NR, et al. Immunoglobulin A deficiency in celiac disease. J Clin Gastroenterol. 2012;46(10):850-854. doi:10.1097/MCG.0b013e31824b2277

  7. Ludvigsson JF, Bai JC, Biagi F, et al. Diagnosis and management of adult coeliac disease: guidelines from the British Society of Gastroenterology. Gut. 2014;63(8):1210-1228. doi:10.1136/gutjnl-2013-306578

  8. Lebwohl B, Green PHR, Söderling J, et al. Association between celiac disease and mortality risk in a Swedish population. JAMA. 2020;323(13):1277-1285. doi:10.1001/jama.2020.1943

  9. Singh P, Arora A, Strand TA, et al. Global prevalence of celiac disease: systematic review and meta-analysis. Clin Gastroenterol Hepatol. 2018;16(6):823-836.e2. doi:10.1016/j.cgh.2017.06.037

  10. Sollid LM, Markussen G, Ek J, et al. Evidence for a primary association of celiac disease to a particular HLA-DQ alpha/beta heterodimer. J Exp Med. 1989;169(1):345-350. doi:10.1084/jem.169.1.345

  11. Salmi TT, Hervonen K, Kautiainen H, et al. Prevalence and incidence of dermatitis herpetiformis: a 40-year prospective study from Finland. Br J Dermatol. 2011;165(2):354-359. doi:10.1111/j.1365-2133.2011.10385.x

  12. Fasano A, Berti I, Gerarduzzi T, et al. Prevalence of celiac disease in at-risk and not-at-risk groups in the United States: a large multicenter study. Arch Intern Med. 2003;163(3):286-292. doi:10.1001/archinte.163.3.286

  13. Zanchetta MB, Longobardi V, Costa F, et al. Impaired bone microarchitecture improves after one year on gluten-free diet: a prospective longitudinal HRpQCT study in women with celiac disease. J Bone Miner Res. 2017;32(1):135-142. doi:10.1002/jbmr.2922

  14. Aaltonen K, Laurikka P, Huhtala H, et al. The long-term consumption of oats in celiac disease patients is safe: a large cross-sectional study. Nutrients. 2017;9(6):611. doi:10.3390/nu9060611

  15. Malamut G, Cellier C. Refractory celiac disease: epidemiology and clinical manifestations. Dig Dis. 2015;33(2):221-226. doi:10.1159/000369519

  16. Catassi C, Gatti S, Fasano A. The new epidemiology of celiac disease. J Pediatr Gastroenterol Nutr. 2014;59(Suppl 1):S7-S9. doi:10.1097/01.mpg.0000450393.23156.59

  17. Rubio-Tapia A, Hill ID, Semrad C, et al. American College of Gastroenterology Guidelines Update: Diagnosis and Management of Celiac Disease. Am J Gastroenterol. 2023;118(1):59-76. doi:10.14309/ajg.0000000000002075

  18. Cosnes J, Cellier C, Viola S, et al. Incidence of autoimmune diseases in celiac disease: protective effect of the gluten-free diet. Clin Gastroenterol Hepatol. 2008;6(7):753-758. doi:10.1016/j.cgh.2007.12.022

  19. Vriezinga SL, Auricchio R, Bravi E, et al. Randomized feeding intervention in infants at high risk for celiac disease. N Engl J Med. 2014;371(14):1304-1315. doi:10.1056/NEJMoa1404172

  20. Jabri B, Sollid LM. T cells in celiac disease. J Immunol. 2017;198(8):3005-3014. doi:10.4049/jimmunol.1601693

  21. Rubio-Tapia A, Murray JA. Classification and management of refractory coeliac disease. Gut. 2010;59(4):547-557. doi:10.1136/gut.2009.195131

  22. Saccone G, Berghella V, Sarno L, et al. Celiac disease and obstetric complications: a systematic review and metaanalysis. Am J Obstet Gynecol. 2016;214(2):225-234. doi:10.1016/j.ajog.2015.09.080

  23. National Institute for Health and Care Excellence. Coeliac disease: recognition, assessment and management. NICE guideline [NG20]. 2015 (updated 2022). https://www.nice.org.uk/guidance/ng20

  24. Al-Toma A, Volta U, Auricchio R, et al. European Society for the Study of Coeliac Disease (ESsCD) guideline for coeliac disease and other gluten-related disorders. United European Gastroenterol J. 2019;7(5):583-613. doi:10.1177/2050640619844125


Last Reviewed: 2026-01-09 | MedVellum Editorial Team | Topic 853/1071

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Learning map

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Prerequisites

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  • Small Intestinal Anatomy and Physiology
  • Immunology of the Gut

Differentials

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Consequences

Complications and downstream problems to keep in mind.